DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and Fcer2

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001029096.1 Gene:Fcer2 / 171075 RGDID:619997 Length:331 Species:Rattus norvegicus


Alignment Length:123 Identity:33/123 - (26%)
Similarity:55/123 - (44%) Gaps:14/123 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWF 115
            |:||..|..|.:|...|.:|...||:..:.:|.|    ||..:.::...|....||...|...| 
  Rat   198 YYFGEGSKQWIQAKFTCSDLEGRLVSIHSQKEQD----FLMQHINKKESWIGLQDLNMEGEFVW- 257

  Fly   116 TNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYICE 173
            .:...:....|:..:|:|.||.|.|:    :.:.|.::  ||..|.   :.|..::||
  Rat   258 PDGSPVGYSNWSPGEPNNGGQGEDCV----MMRGSGQW--NDAFCR---SYLDAWVCE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 31/121 (26%)
Fcer2NP_001029096.1 RILP-like <60..170 CDD:304877
CLECT_DC-SIGN_like 186..306 CDD:153060 31/121 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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