DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and CLEC4F

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_011530937.1 Gene:CLEC4F / 165530 HGNCID:25357 Length:699 Species:Homo sapiens


Alignment Length:140 Identity:36/140 - (25%)
Similarity:49/140 - (35%) Gaps:36/140 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KINDG-YYFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAK 108
            |.|.| .|:|.:...:|:||.:.|....:.|.:..:.:|    .|||....|::.||....|...
Human   584 KFNGGSLYYFSSVKKSWHEAEQFCVSQGAHLASVASKEE----QAFLVEFTSKVYYWIGLTDRGT 644

  Fly   109 TGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYICE 173
            .||  |          ||....|.||.|                   |..|.|:....|.|||..
Human   645 EGS--W----------RWTDGTPFNAAQ-------------------NKAPGSKGSCPLRKYIIV 678

  Fly   174 APEMETISIV 183
            ...|...|.:
Human   679 NSGMGACSFI 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 31/121 (26%)
CLEC4FXP_011530937.1 Lebercilin 374..556 CDD:292252
CLECT_DC-SIGN_like 581..>657 CDD:153060 24/88 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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