DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and LOC108179137

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_017212678.2 Gene:LOC108179137 / 108179137 -ID:- Length:254 Species:Danio rerio


Alignment Length:90 Identity:28/90 - (31%)
Similarity:39/90 - (43%) Gaps:9/90 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTAN-GSRLTYWTSGNDLAKTGSHRW 114
            |.|..|:.||.||...|||..::|.|  .|...|.:....:.| |.....|..   |.||..::|
Zfish    21 YHFINENKNWTEAQRYCRENYTDLAT--VDNMNDMIQLMKSVNDGGVQKIWIG---LQKTDVYKW 80

  Fly   115 -FTNAQRISSLRWARNQPDNAGQKE 138
             :::...:|.|.|....|  ||..|
Zfish    81 HWSSGDPVSFLNWTSGDP--AGSNE 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 28/90 (31%)
LOC108179137XP_017212678.2 CLECT_1 19..127 CDD:153072 28/90 (31%)
CLECT 127..236 CDD:321932
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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