DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lectin-galC1 and reg1b

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_002934628.1 Gene:reg1b / 100485321 XenbaseID:XB-GENE-6043864 Length:162 Species:Xenopus tropicalis


Alignment Length:136 Identity:35/136 - (25%)
Similarity:57/136 - (41%) Gaps:21/136 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GYYFFGTE----SLN---WYEAYEKCREL--NSELVTFETDQEFDAVTAFLTANGSRLTYWTSGN 104
            |::|:.:.    |.|   |.:|..:|...  .:.|.:...|.|...:.:.::|:..:...|...:
 Frog    34 GWFFYRSHCYAVSKNPVPWADAEYECNSYGHGAHLASIMDDAEAAIIGSHVSASQDKEGVWIGLH 98

  Fly   105 DLAKTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIHL--GYIYKDSRKFELNDRPCSQDPNSL 167
            |..|.|..:| |:....:...|....||||..||.|:.|  |..||     :.||..|....|  
 Frog    99 DPEKNGRWKW-TDGSMYNFQAWKSGLPDNAKGKEFCVVLLGGSKYK-----KWNDVGCGGRRN-- 155

  Fly   168 FKYICE 173
              |:|:
 Frog   156 --YVCK 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 33/132 (25%)
reg1bXP_002934628.1 CLECT_REG-1_like 31..160 CDD:153064 35/136 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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