DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and si:dkey-241l7.4

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001096098.2 Gene:si:dkey-241l7.4 / 100124601 ZFINID:ZDB-GENE-041014-238 Length:153 Species:Danio rerio


Alignment Length:179 Identity:40/179 - (22%)
Similarity:69/179 - (38%) Gaps:41/179 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKLTVLLITLLVIAKTGWTREKFSIQVNEGNTFGALVKAEPFTKINDGYYFFGTESLNWYEAYE 65
            |..|..||:..:|.:..|...|:  ::...|           ::......:.|.:.|:||..|..
Zfish     2 MFLLRSLLLLSIVFSMEGADEER--LRCERG-----------WSGSGSRCFRFFSRSVNWVTAER 53

  Fly    66 KCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRW-------FTNAQRISS 123
            .|:.|...|.:.....|.|.:.: |....:|.  |..|:|..:.|...|       :||      
Zfish    54 NCQSLGGNLASVHDQVENDFLLS-LVPGSTRC--WIGGHDGEQDGQWLWSDGSVYGYTN------ 109

  Fly   124 LRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYIC 172
              |...:|  :|..|||:.:.  :..:|.:  ||:.||    :...|:|
Zfish   110 --WCSGEP--SGGSEHCLEIN--WTSNRCW--NDQRCS----TRMGYLC 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 32/129 (25%)
si:dkey-241l7.4NP_001096098.2 CLECT 27..146 CDD:214480 32/150 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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