DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and zgc:172053

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001104712.1 Gene:zgc:172053 / 100002541 ZFINID:ZDB-GENE-080219-25 Length:151 Species:Danio rerio


Alignment Length:184 Identity:39/184 - (21%)
Similarity:72/184 - (39%) Gaps:47/184 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKLTVLLITLLVIAKT---------GWTREKFSIQVNEGNTFGALVKAEPFTKINDGYYFFGTE 56
            ||:..:||..:..:...         ||:  ||.::.                      |.|.::
Zfish     3 MLRNLLLLSVMFSLGNAGIGTCQCPYGWS--KFGVKC----------------------YRFISQ 43

  Fly    57 SLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRW-FTNAQR 120
            |:.|..|.:.|:.|.:.|.:..:..|.|.:.:.:.::.:|.  |..|:|....|  || :|:...
Zfish    44 SVTWATAEKNCQSLGANLASVHSKAENDFLLSLIPSSSTRC--WIGGHDGENEG--RWLWTDGSV 104

  Fly   121 ISSLRWARNQPDNAGQKEHCIHLGYIYKDSRKFELNDRPCSQDPNSLFKYICEA 174
            |....|...:|:|. ..|:|:.:.:.....    .||:.||    :...|:|.|
Zfish   105 IDYNNWCATEPNNQ-NVENCMEMQWTVNRC----WNDQACS----TSMGYMCAA 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 29/122 (24%)
zgc:172053NP_001104712.1 CLECT 26..147 CDD:214480 33/157 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X73
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.