DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lectin-galC1 and si:dkey-28d5.7

DIOPT Version :9

Sequence 1:NP_001188845.1 Gene:Lectin-galC1 / 35216 FlyBaseID:FBgn0016675 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_021333340.1 Gene:si:dkey-28d5.7 / 100000161 ZFINID:ZDB-GENE-060503-259 Length:360 Species:Danio rerio


Alignment Length:243 Identity:52/243 - (21%)
Similarity:73/243 - (30%) Gaps:115/243 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKLTVLLITLLVIA-------------KTGWT------REKFS-----------IQVNEG-NTFG 35
            |...:|||.|..|:             || ||      |||::           ||:|:. |...
Zfish     5 LYFPLLLIALCSISECVQRQYHFINENKT-WTEAQKYCREKYTDLATVDNMNDMIQLNKSVNGVD 68

  Fly    36 ALV---------------KAEPFTKINDGYY---------------------------------F 52
            ..|               ..:||...|.|.|                                 .
Zfish    69 QFVWIGLQRTSVYNWHWSSGDPFFNRNPGQYSNNNCGKIKHGQWFAEACSDTHLFICYNMSRGLV 133

  Fly    53 FGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYWTSGNDLAKTGSHRWF-- 115
            |..:::||.:|...||:.:.:||:.....|...:..|:             ||....||..|.  
Zfish   134 FVNQTMNWRDAQSYCRQNHIDLVSVRNQNESQELEKFI-------------NDTISFGSEVWIGL 185

  Fly   116 ------TNAQRISSLR-WARN----------QPDNAGQ--KEHCI-HL 143
                  .:.|..||.| ||.|          ||:..||  ..:|: ||
Zfish   186 FRDPWQWSDQSNSSFRYWADNFKDFAYCAAIQPNTHGQXGDYNCVSHL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lectin-galC1NP_001188845.1 CLECT 51..173 CDD:153057 30/148 (20%)
si:dkey-28d5.7XP_021333340.1 CLECT 23..127 CDD:321932 17/104 (16%)
CLECT 130..239 CDD:321932 29/117 (25%)
CLECT 245..357 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.