DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax and MICALL1

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_011528773.1 Gene:MICALL1 / 85377 HGNCID:29804 Length:929 Species:Homo sapiens


Alignment Length:375 Identity:72/375 - (19%)
Similarity:109/375 - (29%) Gaps:152/375 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KIDPGARQPYRTARSKGILPGYALLADLQNSVPGQPQQPQPQYGTVQPKHQALQQQQFVD---NT 69
            ::.||.|...|                     ||...||:.|:           |||..:   :.
Human   220 RLGPGTRSGTR---------------------PGPFSQPKQQH-----------QQQLAEDAKDV 252

  Fly    70 PGYGSLRGKAQPQVYQEHYSVETRSPTAGHDFNGSSTTPGYANQGSLPRQAAGASTGLSELDSLL 134
            ||.|                 .:.|..||.:.:|...:|....|.....:..|.   |.||.|  
Human   253 PGGG-----------------PSSSAPAGAEADGPKASPEARPQIPTKPRVPGK---LQELAS-- 295

  Fly   135 QDLQKIDVPVNYSTPV-SKYNTMNSYATVEERPSVDSLLKE--LDNAHIYAVPNGSAHKSPTPGR 196
                   .|....||. .|.:...:.|....||. .||.:|  ::.|...::.||..|:.|.|..
Human   296 -------PPAGRPTPAPRKASESTTPAPPTPRPR-SSLQQENLVEQAGSSSLVNGRLHELPVPKP 352

  Fly   197 HVTITVRETKTEKLTGP--DGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQATKELDDLMA 259
            ..|    ...:|....|  |.|..|:.:...::|.:..|..:.||.                   
Human   353 RGT----PKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSSSPGP------------------- 394

  Fly   260 SLSDFKVSNGTNGIGNGSHPQQHSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTI--VEDSRED 322
                               |.|.|..|::....:.|:|:.       |.::|....  .|:..||
Human   395 -------------------PSQDSRQVENGGTEEVAQPSP-------TASLESKPYNPFEEEEED 433

  Fly   323 QLDSMLGNLQANMSRQGVNTVQKGCCNACEKPIVGQVIT--ALGKTWHPE 370
            :.:                          |.|....:.|  |||   |||
Human   434 KEE--------------------------EAPAAPSLATSPALG---HPE 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830 9/25 (36%)
LIM2_Paxillin_like 407..458 CDD:188723
LIM3_Paxillin_like 466..518 CDD:188724
LIM4_Paxillin 525..576 CDD:188795
MICALL1XP_011528773.1 CH 4..103 CDD:278723
LIM_Mical_like_1 164..218 CDD:188828
DUF3585 737..865 CDD:288945
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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