DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax and DAR7

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001190637.1 Gene:DAR7 / 836793 AraportID:AT5G66610 Length:587 Species:Arabidopsis thaliana


Alignment Length:389 Identity:87/389 - (22%)
Similarity:132/389 - (33%) Gaps:119/389 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 VRETKTEK--LTGPDGPVGTVEEQIVQQK-------DSYTPNHAVPGQQVHQAYTSQATKELDDL 257
            |.||:.:|  :...|..:..:.|:.:::|       |....|      ...||...|.:..:.:|
plant    80 VEETELDKSVVDEEDQQLSKIVEESLKEKGKSKQFEDDQVEN------DEQQALMVQESLYMVEL 138

  Fly   258 MASLSDFKVSNGTNGIGNGSHPQQHSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSRED 322
            .|.|.:.|         |.|.....:...|.|.|...:...|| |..|....:||          
plant   139 SAQLEEDK---------NISTIPPLNEDAQLQKVIWESAKGKG-QIEHFKDPVEE---------- 183

  Fly   323 QLDSMLGNLQANMSRQGVNTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFF 387
              |..|..:..|::..  :::..||.:|.|   .|:.:.|||..||||.|.|.:|.:.:....|.
plant   184 --DGNLPRVDLNVNHP--HSICDGCKSAIE---YGRSVHALGVNWHPECFCCRYCDKPIAMHEFS 241

  Fly   388 ERDGFPYCEPDYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQ--CGQQFGEEGFHERDG 450
            ...|  .|....:....|.|..|......:        .:.||.|..:  |       .|||.||
plant   242 NTKG--RCHITCYERSHPNCHVCKKKFPGR--------KYKEHPFWKEKYC-------PFHEVDG 289

  Fly   451 KPYCRNDYFEMFAPKCNGCNRAIME----NYISALNSQWHPDCFVCRDCR-------QP--FQGG 502
                        .|||..|.|  :|    .|:...:::|.  |..|.:|.       ||  |:..
plant   290 ------------TPKCCSCER--LEPWGTKYVMLADNRWL--CVKCMECAVMDTYECQPLHFEIR 338

  Fly   503 SFF----------------DHEGLPYCET-------HYHAKRGSLCAGCSKPITGRCITAMFKK 543
            .||                :.|.|...|.       |....|| :|..     .|:.:.::|||
plant   339 EFFGSLNMKVEKEFPLLLVEKEALKKAEAQEKIDNQHGVVTRG-ICLS-----EGQIVNSVFKK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830 16/51 (31%)
LIM2_Paxillin_like 407..458 CDD:188723 11/52 (21%)
LIM3_Paxillin_like 466..518 CDD:188724 18/87 (21%)
LIM4_Paxillin 525..576 CDD:188795 5/19 (26%)
DAR7NP_001190637.1 LIM_DA1 201..252 CDD:188782 18/55 (33%)
DUF3633 343..580 CDD:289113 11/60 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 47 0.796 Domainoid score I4515
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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