Protein Alignment Pax and AT2G28460

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: NP_180413.2
• Gene: AT2G28460 / 817394
• AraportID: AT2G28460
• Length: 720
• Species: Arabidopsis thaliana
• Alignment Length: 309
• Identity: 59/309 - (19%)
• Similarity: 84/309 - (27%)
• Gaps: 122/309 - (39%)

  Fly   348 CNACEKPI---VGQVITALGKTWHPEHFTCNH-----CSQELGTRNFFERDGFPYCEPDYHNLFS 404
            |:.|.|.|   .|..:...|         |::     |:.:....:..|.:|.|  |.....:..
plant   355 CSVCRKKIDNDYGGYVCTKG---------CSYAAHSKCATQSNVWDGIELEGEP--EDIEEEVLP 408

  Fly   405 PRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFH----ERDGKPYCRNDYFEMFAPK 465
            |.....:|.|                       |.|..:..|    |..|:.|..|       .:
plant   409 PFLEISDGII-----------------------QHFSHQQHHMKLDENTGRDYDEN-------KE 443

  Fly   466 CNGCNRAI-MENYISALNSQW--HPDCF-VCRDCRQP-----------FQG-------------- 501
            |..|.|.| ..|:.|.|...:  |.:|. :.|....|           |.|
plant   444 CEACIRPIYFGNFYSCLECDFILHEECANLSRKIHHPIHPHLLNLIGGFDGVINYYNDKCSACIG 508

  Fly   502 ---GSFFDHEGLPYCETHYHAKRGSLCAGCSKPIT--------------GRCITAMFKKFHPEHF 549
               |.||...|...|:...|.:    ||..|:|:.              |..|.....|...|.|
plant   509 LCKGGFFYECGKQGCKFMLHVQ----CATTSEPLVHESHRHPLFLTSKPGEKIRCSVCKDSEETF 569

  Fly   550 --------VCAFCLKQLNKGTFKEQK-----------DKPYCHTCFDKI 579
                    :|.:|.....|..:|..|           ...:|..|..||
plant   570 NCIECDFALCFYCAILPQKVRYKHDKHTLTLSYGKETGTSWCEVCEAKI 618

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	12/59 (20%)
		LIM2_Paxillin_like	407..458	CDD:188723	9/54 (17%)
		LIM3_Paxillin_like	466..518	CDD:188724	18/83 (22%)
		LIM4_Paxillin	525..576	CDD:188795	15/83 (18%)
AT2G28460	NP_180413.2	C1_3	243..271	CDD:284959
		C1_3	298..327	CDD:284959
		C1_2	353..384	CDD:281148	7/37 (19%)
		C1_3	442..471	CDD:284959	8/28 (29%)
		C1_2	610..639	CDD:281148	4/9 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1593918at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010