Protein Alignment Pax and lpp

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: XP_012818600.1
• Gene: lpp / 779875
• XenbaseID: XB-GENE-951633
• Length: 614
• Species: Xenopus tropicalis
• Alignment Length: 601
• Identity: 131/601 - (21%)
• Similarity: 216/601 - (35%)
• Gaps: 172/601 - (28%)

  Fly     2 DRTMYG-KIDPGAR--QPYRTARSKGILPGYALLADLQNSVPGQPQQPQ-----------PQYGT 52
            |..|:. :|:.|.:  :..|::....|....::||||:||.|.:|:.||           |..||
 Frog    98 DEAMFNVQINTGGKTIEERRSSLDAEIDSLTSILADLENSSPYKPRTPQGPGSNTGTLTHPSAGT 162

  Fly    53 VQPKHQALQQQQFVDNTPGYGSLR---GKAQPQVYQEHYSVETRSPTAGHDFNGSSTTPGYANQG 114
            ....|    ::..:.|.|...:.:   .|.|||                     |::.|.
 Frog   163 PVTGH----KRMIIPNQPPLTATKKSATKPQPQ---------------------STSQPA----- 197

  Fly   115 SLPRQAAGASTGLSELDSLLQDLQKIDVPVNYSTPVSKYNTMNSYATVEERPSVDSLLKELD-NA 178
              |..:.||.             :...||..|:|           |:...||:.:..:|... :.
 Frog   198 --PAGSPGAQ-------------RPQPVPAPYAT-----------ASTPSRPTFNVQVKSAQPSP 236

  Fly   179 HIYAVPNG---SAHKSPTPGRHVTITVRETKTEKLTGPDGPVGTVEEQIVQQKDSYTPNHAVPGQ 240
            |.  ||.|   ..:.||.|.::.        ..:.|...||:....:...|:   |.|  ..|.:
 Frog   237 HF--VPPGPQLGQNYSPAPNQYY--------APQPTRSPGPMQYAPQPRGQE---YIP--PPPAR 286

  Fly   241 QVHQAY---TSQATKELDDLMASLSDFKVSNGTNGI------GNGSHPQQHSS---------TVQ 287
            .|...|   ....:|..|....|:..:   .|.||.      ..|..|:...|         .|.
 Frog   287 YVEPGYGYSQGNQSKYQDPYYQSVQGY---GGRNGSEVPYTQQGGWKPEPAYSPIPAVGQQPAVG 348

  Fly   288 HQTVTDYARPNKGSQQAHLTQT--------------IEETTIV--EDSREDQLDSMLGNLQANMS 336
            .|....|..||  :::.::|..              :.:.:.:  ||..|.....||.:::...|
 Frog   349 QQPAGSYQPPN--TKKTYITDPPYIPPPPPQPKGPYLAQASSLRPEDELERLTKKMLYDMENPPS 411

  Fly   337 RQGVNTVQKGCCNACEKPIVGQ--VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDY 399
            .:     ..|.|:.|.:.:||:  ..||:.:.:|.|.|||..|:.:|..:.|:..:...:|||.|
 Frog   412 EE-----YFGRCSRCGENVVGEGTGCTAMDQVFHVECFTCMTCNSKLRGQPFYAVEKKAFCEPCY 471

  Fly   400 HNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPY---------CR 455
            ..... :|:.|...|:::.:.|..|.:|...|.|..|        |...||.|:         |.
 Frog   472 IRTLE-KCSVCAKPIMERILRATGKAYHPHCFTCVVC--------FRSLDGIPFTVDASGQIHCI 527

  Fly   456 NDYFEMFAPKCNGCNRAIMEN-------YISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYC 513
            .|:.:.|||:|:.|...||..       .|.||:..:|..|:.|.||......|   :::|....
 Frog   528 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVQCYRCEDCGSLLSEG---ENQGCYPL 589

  Fly   514 ETHYHAKRGSLCAGCS 529
            :.|.      ||..|:
 Frog   590 DGHI------LCKACN 599

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	17/53 (32%)
		LIM2_Paxillin_like	407..458	CDD:188723	14/59 (24%)
		LIM3_Paxillin_like	466..518	CDD:188724	15/58 (26%)
		LIM4_Paxillin	525..576	CDD:188795	2/5 (40%)
lpp	XP_012818600.1	PHA03247	<4..358	CDD:223021	67/333 (20%)
		PRK10263	<171..>341	CDD:236669	44/239 (18%)
		LIM1_TRIP6	418..471	CDD:188736	17/52 (33%)
		LIM	478..537	CDD:413332	17/66 (26%)
		LIM3_TRIP6	538..603	CDD:188820	18/71 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910