DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Pax and Limd2

DIOPT Version :9

Sequence 1:	NP_001033913.1	Gene:	Pax / 35215	FlyBaseID:	FBgn0041789	Length:	581	Species:	Drosophila melanogaster
Sequence 2:	NP_001343387.1	Gene:	Limd2 / 67803	MGIID:	1915053	Length:	128	Species:	Mus musculus

Alignment Length:	101	Identity:	28/101 - (27%)
Similarity:	40/101 - (39%)	Gaps:	17/101 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   329 GNLQANMSRQ-----GVNTVQ-----------KGCCNACEKPIVG-QVITALGKTWHPEHFTCNH 376
            |..||..|.:     |.:|||           |..|.||:|.:.. :.:.|....:|...|.|.|
Mouse     6 GAAQATPSHEAKGSSGSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKH 70

  Fly   377 CSQELGTRNFFERDGFPYCEPDYHNLFSPRCAYCNG 412
            |..:|...::....|..||.|.:..||..:..|..|
Mouse    71 CHTKLSLGSYAAMHGEFYCRPHFQQLFKSKGNYDEG 106

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	15/52 (29%)
		LIM2_Paxillin_like	407..458	CDD:188723	2/6 (33%)
		LIM3_Paxillin_like	466..518	CDD:188724
		LIM4_Paxillin	525..576	CDD:188795
Limd2	NP_001343387.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..25		5/18 (28%)
Limd2	NP_001343387.1	LIM_Eplin_like_1	41..93	CDD:188870	15/51 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910