Protein Alignment Pax and lpp

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: NP_957492.1
• Gene: lpp / 573024
• ZFINID: ZDB-GENE-040426-918
• Length: 556
• Species: Danio rerio
• Alignment Length: 636
• Identity: 130/636 - (20%)
• Similarity: 210/636 - (33%)
• Gaps: 184/636 - (28%)

  Fly     5 MYGKIDPGARQPYRTARSKGILP-GYALLADLQNSVP---GQPQQPQPQYGTVQPKHQALQQQQF 65
            |:|..:.|.:|.:.:||.:..|| |...::..|...|   .....|:|::...:....|..:..:
Zfish     1 MWGGHNDGDQQGHVSARMETSLPMGTTSISISQQQAPKKFAPVVAPKPKFNPYKQPGDATHEGDY 65

  Fly    66 VDNTPGYGSLRGKAQPQVYQEHYSVETRSPTAGHDFNGSSTTPGYANQGSLPRQAAGASTGLSEL 130
            ....|......|...|..:.....::..|  .|....|...|        |..:.:.....:..|
Zfish    66 PPPPPPVVDPSGLPSPSSFPPPPPMDETS--LGFQIKGPEKT--------LEERRSSLDAEIDSL 120

  Fly   131 DSLLQDLQKIDVPVNYSTPVSKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPG 195
            .|:|.||:.       |:|.......||                       |.|..:...:|..|
Zfish   121 TSILADLES-------SSPYKPRTQQNS-----------------------ASPAATGSTAPVTG 155

  Fly   196 -RHVTITVRE--TKTEKLT-GPDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQATKELDD 256
             |.:.|..:.  |.|:|.| .|..|...........:..|.|   .| |.|..:||:.:|
Zfish   156 YRRMVIPTQPPLTATKKSTPKPQAPQNVTPPASSSPRPQYQP---AP-QPVPASYTTAST----- 211

  Fly   257 LMASLSDFKV----------SNGTNGIG---------------------------NGSHPQQH-- 282
              .|...|.|          .....|.|                           :|.:..||
Zfish   212 --PSQPTFNVQVRAAQPAPQQQPVRGPGQVQYMPAQPRAPEFAYGPPQPGFCPAPSGGYQDQHYG 274

  Fly   283 ------------SSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVED----------------- 318
                        :....|...|    |::|.|.|.     .:.|.:.|
Zfish   275 GAPGYGGQNTWRAEPSHHPAPT----PSQGYQPAP-----PKKTYITDPPASLAPFAGGSSAPHK 330

  Fly   319 -SREDQLDSMLGNLQANMSRQGVNTVQK---GCCNACEKPIVGQ--VITALGKTWHPEHFTCNHC 377
             ..|::||.:...:..:|.    |...:   |.|::|.:.:||:  ..||:.:.:|.:.|.|..|
Zfish   331 GRPEEELDRLTKKMLYDMD----NPPSEEYFGRCSSCGENVVGEGTGCTAMDQVFHVDCFICMTC 391

  Fly   378 SQELGTRNFFERDGFPYCEPDYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGE 442
            ..:|..:.|:..:...||||.|.|... .|..|...|:::.:.|..|.:|.:.|.|..|.:..
Zfish   392 GSKLRGKPFYAVEKKAYCEPCYINTLE-TCNICYKPIMERILRATGKAYHPQCFTCVVCHRSL-- 453

  Fly   443 EGFHERDGKPY---------CRNDYFEMFAPKCNGCNRAIMEN-------YISALNSQWHPDCFV 491
                  ||.|:         |..|:.:.|||:|:.||..||..       .|.||:..:|..|:.
Zfish   454 ------DGIPFTVDASNHIHCIEDFHKKFAPRCSVCNEPIMPAPGQEETVRIVALDRDFHVQCYR 512

  Fly   492 CRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSLCAGCS----KPITGRCIT 538
            |.||......|   |::|....:.|.      ||..|:    :.:|.:..|
Zfish   513 CEDCGCLLSEG---DNQGCYPLDGHV------LCKNCNTSRIQALTAKATT 554

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	16/53 (30%)
		LIM2_Paxillin_like	407..458	CDD:188723	13/59 (22%)
		LIM3_Paxillin_like	466..518	CDD:188724	17/58 (29%)
		LIM4_Paxillin	525..576	CDD:188795	4/18 (22%)
lpp	NP_957492.1	DUF2413	123..>201	CDD:287302	22/111 (20%)
		LIM1_TRIP6	360..413	CDD:188736	16/52 (31%)
		LIM	420..479	CDD:295319	16/66 (24%)
		LIM3_TRIP6	480..545	CDD:188820	20/73 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910