Protein Alignment Pax and synpo2la

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: XP_009305650.2
• Gene: synpo2la / 563843
• ZFINID: ZDB-GENE-090828-4
• Length: 1179
• Species: Danio rerio
• Alignment Length: 406
• Identity: 74/406 - (18%)
• Similarity: 126/406 - (31%)
• Gaps: 134/406 - (33%)

  Fly    43 PQQPQPQYGTVQPKHQALQQ----QQFVDNTPG----YGSLRGKAQPQVYQEHYSVETRSPTAGH 99
            |...:|...:|:..|:....    :..:.:.||    ||.....|....::.|...:.|||
Zfish   117 PSSSRPHQSSVRQIHRGTLMSPTGRSGLTSPPGSEAYYGETDSDADVAAHERHRKPKRRSP---- 177

  Fly   100 DFNGSSTTPGYANQGSLPRQAAGASTG-LSELDS--------LLQDLQKIDV-------PVNYST 148
                 |.:||.|.:.|    ..||.|. :|..||        ||...::.|.       .|.|..
Zfish   178 -----SNSPGKAGRAS----PEGAETSEMSGYDSASDAQMYKLLGPNKREDTLPGVARREVIYQP 233

  Fly   149 PV-----SKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTITVRETKTE 208
            |:     |:.:|..|..:.:::...:.|::|  ::......|.....||...:...:....::..
Zfish   234 PLHGAWSSQTSTETSSMSADDQNPREGLMEE--DSGFQEPTNIPPLVSPERAKEALMLSSRSQLV 296

  Fly   209 KLTGP-DGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQATKELDDLMASLSDFKVSNGTNG 272
            .:.|| |.||.  ||..:...|.........|:.:......:|..:...:.:.|:|
Zfish   297 PMVGPVDNPVD--EELTLTYMDKAKQAKLNRGETITDKQVKEARSKCRTIASLLTD--------- 350

  Fly   273 IGNGSHPQQHSSTV-----QHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQ 332
                 .|..||..|     :.|....|...:.||             :.||.|:|
Zfish   351 -----APNPHSKGVLMFKKRRQRSKKYTLTSFGS-------------VDEDMRQD---------- 387

  Fly   333 ANMSRQGVNTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGF----- 392
             :....|:                           .|            |:.:.|:.:||
Zfish   388 -SQEEDGI---------------------------FP------------GSESEFDEEGFSAAPD 412

  Fly   393 PYCEPDYHNLFSPRCA 408
            |..:.||..:...|||
Zfish   413 PTWDSDYLEMLEKRCA 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	7/56 (13%)
		LIM2_Paxillin_like	407..458	CDD:188723	2/2 (100%)
		LIM3_Paxillin_like	466..518	CDD:188724
		LIM4_Paxillin	525..576	CDD:188795
synpo2la	XP_009305650.2	PDZ_signaling	5..84	CDD:238492
		TrbI	336..>516	CDD:329122	27/170 (16%)
		Atrophin-1	<491..961	CDD:331285
		DNA_pol3_gamma3	<1014..1178	CDD:331207

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1703
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900