DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Pax and LOC556668

DIOPT Version :9

Sequence 1:	NP_001033913.1	Gene:	Pax / 35215	FlyBaseID:	FBgn0041789	Length:	581	Species:	Drosophila melanogaster
Sequence 2:	XP_009295676.1	Gene:	LOC556668 / 556668	-ID:	-	Length:	1635	Species:	Danio rerio

Alignment Length:	398	Identity:	69/398 - (17%)
Similarity:	131/398 - (32%)	Gaps:	128/398 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly    31 LLADLQNSVPGQPQQPQPQYGTVQ-PKHQALQQQQFVDNTPGYGSLRGKAQPQVYQEHYSVETRS 94
            :|.|:|:..   |::.:.:.|..| |||        |..|      .||..|.::.:...::...
Zfish   472 ILRDIQSPC---PRKNEDKCGLDQKPKH--------VSET------NGKETPGIHHKPDIIDANE 519

  Fly    95 PTAG------------HDFNGSSTTPGYANQGSLPRQAAGASTGLSELDSLLQDLQKIDVPVNYS 147
            ..||            ||......|                :..:::.:.:|:...:....:..|
Zfish   520 VFAGISRAKQVFENISHDKENIPPT----------------NNSITQEEEMLKANVRNRAQMFES 568

  Fly   148 TPVSKYNTMNSYATVEERPSV--------------------DSLLKELDNAHI-----------Y 181
            ||:.|.|..    |.||..::                    .|:|:..::.|:           .
Zfish   569 TPLDKINLQ----TKEESETILEDMQETLLSLCNFSIIHSDGSILEANESGHVKKARYHFIEDTR 629

  Fly   182 AVPN------GSAHK---SPTPGRHVTITVRETKTEKLTGPDGPVGTVEEQIVQQKDSYTPNHAV 237
            ||.|      ||...   ...||.:...||...|.:.       .|.||   :.:.|  .|.|.:
Zfish   630 AVINEEEIVTGSIKSIMLQMLPGTNFNPTVTFLKEDS-------QGNVE---ILKVD--VPIHQL 682

  Fly   238 PGQQVHQAYTSQATKELDDLMASLSDFK----VSNGTNGIG-----------NGSHPQQHSSTVQ 287
            |..|..:..|:...:..:||:......:    :.:|..|||           .||........::
Zfish   683 PFTQDKECRTANVVQITEDLLGQEESLRKGVLIQDGATGIGEITVYALFIHSKGSTGLMGFGKIE 747

  Fly   288 HQTVTDYARPNKGSQQAHLTQTI---EETTIVEDSREDQLDSMLGNL--------QANMSRQGVN 341
            .::::........|::.:|.|.:   |...:||..:...:..:.|::        :..:|.....
Zfish   748 GRSISSSLSNGPASKKINLKQDVNSSESALVVETGKTSNVQLIQGSVKKEEPNHQETEISESTGQ 812

  Fly   342 TVQKGCCN 349
            :.:.|.||
Zfish   813 SEKTGPCN 820

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	2/2 (100%)
		LIM2_Paxillin_like	407..458	CDD:188723
		LIM3_Paxillin_like	466..518	CDD:188724
		LIM4_Paxillin	525..576	CDD:188795
LOC556668	XP_009295676.1	PHA03247	<1027..1214	CDD:223021
LOC556668	XP_009295676.1	PTZ00449	<1454..>1603	CDD:185628
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910