DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax and esn

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster


Alignment Length:546 Identity:130/546 - (23%)
Similarity:198/546 - (36%) Gaps:118/546 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LADLQNSV---PGQPQQPQPQYGTVQPKHQALQQQQFVDN---TPGYGSLRGKAQPQVYQEH--- 87
            |:|::..:   .|..::|.|...|. ||  ..|..|.::.   ||...|.....|....|:|   
  Fly   301 LSDIEEQLARFDGHSKRPPPPAATA-PK--ITQPSQVIEKFKPTPAPRSSGNMQQAPQQQQHPHP 362

  Fly    88 ----YSVETRSPTAGHDFNGSSTTPGYANQGSLPRQAAG--ASTGLSELDSLLQDLQKIDVPVNY 146
                |..:|.|.....:..|:..|  :|:....|..|..  |||.            .:|||   
  Fly   363 PSSSYYTQTESELLQIEAGGTGLT--FASHSQRPESAISQVASTA------------HLDVP--- 410

  Fly   147 STPVSKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTITVRETKTEKLT 211
                       |.|:.....|              ||..||.....:.||.|:...|     :..
  Fly   411 -----------SAASSGSGGS--------------AVSGGSGGAPESAGRFVSPLQR-----RHC 445

  Fly   212 GPDG--PVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQA-----TKELDDLMASLSDFKVSNG 269
            .|..  |:.:|...:  :..||....||.|...|.::..|.     ::..||...:|.::     
  Fly   446 QPPSHLPLNSVASPL--RTASYKSAAAVAGHGFHHSHHQQLDFQRNSQSDDDSGCALEEY----- 503

  Fly   270 TNGIGNGSHPQQHSSTVQHQTVTDYARP--NKGSQQAHLTQTIEETTIVED--------SREDQL 324
             ..:..|..|.|  ..:....:.|...|  |...::..:.|.:.:....::        |.|::.
  Fly   504 -TWVPPGLRPDQ--VRLYFSQLPDDKVPYVNSPGEKYRVKQLLHQLPPQDNEVRYCHSLSDEERK 565

  Fly   325 DSMLGNLQANMSRQGVNTVQ----KGCCNACEKPIVGQVITALGK------TWHPEHFTCNHCSQ 379
            :..:.:.|......|...|:    :..|..||:|:.|..|....:      .|||..|.|:.|.:
  Fly   566 ELRIFSAQRKREALGRGAVRLLSDERPCKGCEEPLSGGDIVVFAQRLGAQLCWHPGCFVCSVCKE 630

  Fly   380 ELGTRNFFERDGFPYCEPDYHNLFSPRCAYCNGAIL-DKCVTALDKTWHTEHFFCAQCGQQFGEE 443
            .|....:|:|||..||...:.....|||:.|:..|. |:|..|..:|||.:||.|.:|..|.|.:
  Fly   631 LLVDLIYFQRDGNLYCGRHHAETQKPRCSACDEIIFSDECTEAEGRTWHMKHFACQECEHQLGGQ 695

  Fly   444 GFHERDGKPYCRNDYFEMFAPKCNGCNRAI--MENYISALNSQWH--PDCFVCRDCRQPFQGGSF 504
            .:..|:|||||...:..|||..|:.|...|  .:..:|.....||  ..||.|..||....|..|
  Fly   696 RYIMREGKPYCLACFDTMFAEYCDYCGEVIGVDQGQMSHDGQHWHATDQCFSCCTCRCSLLGRPF 760

  Fly   505 FDHEGLPYCETHYHAKRGSLCAGCSK 530
            ....|..||.           ..|||
  Fly   761 LPRRGTIYCS-----------IACSK 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830 19/57 (33%)
LIM2_Paxillin_like 407..458 CDD:188723 21/51 (41%)
LIM3_Paxillin_like 466..518 CDD:188724 16/55 (29%)
LIM4_Paxillin 525..576 CDD:188795 3/6 (50%)
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 15/103 (15%)
LIM1_Prickle 593..651 CDD:188799 19/57 (33%)
LIM2_Prickle 656..711 CDD:188802 23/54 (43%)
LIM3_Prickle 716..774 CDD:188804 16/68 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47221
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
32.910

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