| Sequence 1: | NP_523601.2 | Gene: | Pax / 35215 | FlyBaseID: | FBgn0041789 | Length: | 581 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017457250.1 | Gene: | Lims1 / 499443 | RGDID: | 1560732 | Length: | 407 | Species: | Rattus norvegicus |
| Alignment Length: | 240 | Identity: | 80/240 - (33%) |
|---|---|---|---|
| Similarity: | 123/240 - (51%) | Gaps: | 9/240 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 347 CCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSPR----- 406
Fly 407 -CAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEMFAPKCNGCN 470
Fly 471 RAIMENYISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSLCAGCSKPITGR 535
Fly 536 CITAMFKKFHPEHFVCAFCLKQLN-KGTFKEQKDKPYCHTCFDKI 579 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Pax | NP_523601.2 | LIM1_Paxillin_like | 348..400 | CDD:259830 | 19/51 (37%) |
| LIM2_Paxillin_like | 407..458 | CDD:188723 | 14/50 (28%) | ||
| LIM3_Paxillin_like | 466..518 | CDD:188724 | 22/51 (43%) | ||
| LIM4_Paxillin | 525..576 | CDD:188795 | 15/51 (29%) | ||
| Lims1 | XP_017457250.1 | LIM1_PINCH | 81..139 | CDD:188717 | |
| LIM2_PINCH | 142..193 | CDD:188718 | 19/51 (37%) | ||
| LIM3_PINCH | 206..256 | CDD:188719 | 14/50 (28%) | ||
| LIM4_PINCH | 262..315 | CDD:188720 | 22/52 (42%) | ||
| LIM5_PINCH | 323..376 | CDD:188721 | 16/52 (31%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||