Sequence 1: | NP_001033913.1 | Gene: | Pax / 35215 | FlyBaseID: | FBgn0041789 | Length: | 581 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006252699.3 | Gene: | Ldb3 / 498587 | RGDID: | 1564875 | Length: | 771 | Species: | Rattus norvegicus |
Alignment Length: | 603 | Identity: | 140/603 - (23%) |
---|---|---|---|
Similarity: | 205/603 - (33%) | Gaps: | 192/603 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 GTVQPKHQALQQQQFVDNTPGYGSLRGKAQPQVYQEH---YSVETRSPTAGHDFNGSSTTPGYAN 112
Fly 113 QGSLPRQAAGASTGLSELDSLLQDLQKIDVPVNYSTPVSKYNTMNSYATV---EERPSVDS---- 170
Fly 171 ------------LLKELDNAHIYAVPNGSA-HKSPTPGRHVTITVRETKTEKLTGP--------- 213
Fly 214 -------------------------DGPVGTVEEQIVQQKDSYTPNHAV-PGQQVHQAYT----S 248
Fly 249 QATKELDDLMASL----------SDFKVSNGTN----------------------------GIGN 275
Fly 276 GSHPQQHSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQGV 340
Fly 341 NTVQKGC--------------------------------CNACEKPIVGQVITALGKTWHPEHFT 373
Fly 374 CNHCSQELGTRNFFERDGFPYCEPDYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQ 438
Fly 439 QFGEEGFHERDGKPYCRNDYFEMFAPKCNGCNRAIM--ENYISALNSQWHPDCFVCRDCRQPFQG 501
Fly 502 GSFFDHEGLPYCETHYHA 519 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pax | NP_001033913.1 | LIM1_Paxillin_like | 348..400 | CDD:259830 | 19/51 (37%) |
LIM2_Paxillin_like | 407..458 | CDD:188723 | 24/50 (48%) | ||
LIM3_Paxillin_like | 466..518 | CDD:188724 | 17/53 (32%) | ||
LIM4_Paxillin | 525..576 | CDD:188795 | |||
Ldb3 | XP_006252699.3 | PDZ_signaling | 50..126 | CDD:238492 | |
DUF4749 | 240..341 | CDD:406377 | 26/127 (20%) | ||
PHA03247 | <426..576 | CDD:223021 | 21/158 (13%) | ||
LIM1_ZASP_Cypher | 595..646 | CDD:188838 | 19/50 (38%) | ||
LIM2_Enigma_like | 654..705 | CDD:188748 | 24/50 (48%) | ||
LIM3_ZASP_Cypher | 713..767 | CDD:188844 | 17/53 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000055 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |