Protein Alignment Pax and pk

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: NP_724538.1
• Gene: pk / 45343
• FlyBaseID: FBgn0003090
• Length: 1299
• Species: Drosophila melanogaster
• Alignment Length: 541
• Identity: 138/541 - (25%)
• Similarity: 191/541 - (35%)
• Gaps: 163/541 - (30%)

  Fly    17 YRTARSKGILPGYALLADLQNSVPGQPQQPQPQYGTVQPKHQALQQQQFVDNTPGYGSLRGKAQP 81
            |....:.||||...|           |.|...||  :.|.|   ||.......||.||  |.|
  Fly   402 YAAQAAAGILPTSPL-----------PLQRHQQY--LPPHH---QQHPGAGMGPGPGS--GAA-- 446

  Fly    82 QVYQEHYSVETRSPTAGHDFN-GSSTTPGYANQGSLPRQAAGASTGLSELDSLLQDLQKIDVPVN 145
                       ..|..|..:: |.|..|.|:| ..||
  Fly   447 -----------AGPPLGPQYSPGCSANPKYSN-AQLP---------------------------- 471

  Fly   146 YSTPVSKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNG-----SAHKSPTPGRHVTITVRET 205
               |...::...|.|.  ..||..|||..         |.|     |||.....|.|:.:
  Fly   472 ---PPPHHHHQLSPAL--STPSPPSLLHH---------PAGGTSSASAHAPFLGGPHMDM----- 517

  Fly   206 KTEKLTGPDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQA--YTSQATKELDDLMASLSDFKVSN 268
              ::.:..|...|...|:.     ::.|    ||.:..|.  |.||           :.|.||..
  Fly   518 --QRQSHSDDDSGCALEEY-----TWVP----PGLRPDQVRLYFSQ-----------IPDDKVPY 560

  Fly   269 GTNGIGNGSHPQQ-------HSSTVQH-QTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLD 325
             .|..|.....:|       |.:.|:: .::||..|     ::..|..|        ..:.|.|.
  Fly   561 -VNSPGEQYRVRQLLHQLPPHDNEVRYCHSLTDEER-----KELRLFST--------QRKRDALG 611

  Fly   326 SMLGNLQANMSRQGVNTVQKGCCNACEKPI----VGQVITALG--KTWHPEHFTCNHCSQELGTR 384
            .  ||::..||.:.        |:.|:..|    :....|.||  .:|||..|.|:.|.:.|...
  Fly   612 R--GNVRQLMSARP--------CDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELLVDL 666

  Fly   385 NFFERDGFPYCEPDYHNLFSPRCAYCNGAIL-DKCVTALDKTWHTEHFFCAQCGQQFGEEGFHER 448
            .:|.|||..||...:.....|||:.|:..|| |:|..|..:.||..||.|.:|.:|.|.:.:..|
  Fly   667 IYFHRDGRMYCGRHHAETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIMR 731

  Fly   449 DGKPYCRNDYFEMFAPKCNGCNRAI--MENYISALNSQWH--PDCFVCRDCRQPFQGGSFFDHEG 509
            :|||||.:.:..|||..|:.|..||  .:..:|.....||  .:||.|..||....|.:|....|
  Fly   732 EGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQMSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRG 796

  Fly   510 LPYCETHYHAKRGSLCAGCSK 530
            ..||.           ..|||
  Fly   797 AIYCS-----------IACSK 806

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	19/57 (33%)
		LIM2_Paxillin_like	407..458	CDD:188723	21/51 (41%)
		LIM3_Paxillin_like	466..518	CDD:188724	17/55 (31%)
		LIM4_Paxillin	525..576	CDD:188795	3/6 (50%)
pk	NP_724538.1	PET_Prickle	523..618	CDD:193602	27/130 (21%)
		LIM1_Prickle	624..682	CDD:188799	19/57 (33%)
		LIM2_Prickle	687..742	CDD:188802	23/54 (43%)
		LIM3_Prickle	747..805	CDD:188804	17/68 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1593918at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm47221
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X39
	4	3.920