Protein Alignment Pax and stck

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: NP_731242.1
• Gene: stck / 40999
• FlyBaseID: FBgn0020249
• Length: 348
• Species: Drosophila melanogaster
• Alignment Length: 320
• Identity: 87/320 - (27%)
• Similarity: 130/320 - (40%)
• Gaps: 78/320 - (24%)

  Fly   333 ANMSRQGVNTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEP 397
            ||||...::..:  |.:..|.  ..:::.:.|:.||.:.|.|..|.:......|:|.:|..|||.
  Fly    12 ANMSLGAMHCTR--CADGFEP--TEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCER 72

  Fly   398 DYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGF---------HERDGKP- 452
            |:|.||:|.|..|...::.:.:.|:..:||.:.|.|..|.::..:.||         ||.:.|.
  Fly    73 DFHVLFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVK 137

  Fly   453 ---------------------------------------------------------------YC 454
                                                                           ||
  Fly   138 AEITGRYVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYC 202

  Fly   455 RNDYFEMFAPKCNGCNRAIMENYISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHA 519
            ...:.:|..|.|..|.|.|.|..::||...||.:.|||..|.:||.|...::..||.|||||||.
  Fly   203 LRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQ 267

  Fly   520 KRGSLCAGCSKPITGRCITAMFKKFHPEHFVCAFC-LKQLNKGTFKEQKDKPYCHTCFDK 578
            ..|:||..|::.|.|...||:.|.:...||.|:.| .|...|..|.|..:||.|..|:|:
  Fly   268 LFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCYDR 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	14/51 (27%)
		LIM2_Paxillin_like	407..458	CDD:188723	15/123 (12%)
		LIM3_Paxillin_like	466..518	CDD:188724	23/51 (45%)
		LIM4_Paxillin	525..576	CDD:188795	18/51 (35%)
stck	NP_731242.1	LIM1_PINCH	21..79	CDD:188717	17/61 (28%)
		LIM2_PINCH	82..133	CDD:188718	12/50 (24%)
		LIM3_PINCH	146..206	CDD:188719	2/59 (3%)
		LIM4_PINCH	212..265	CDD:188720	23/52 (44%)
		LIM5_PINCH	273..326	CDD:188721	19/52 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	50	1.000	Domainoid score	I3371
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1593918at2759
OrthoFinder	1	1.000	-	-		FOG0000055
OrthoInspector	1	1.000	-	-		otm47179
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X39
	6	5.920