Sequence 1: | NP_001033913.1 | Gene: | Pax / 35215 | FlyBaseID: | FBgn0041789 | Length: | 581 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001358423.1 | Gene: | LIMS1 / 3987 | HGNCID: | 6616 | Length: | 398 | Species: | Homo sapiens |
Alignment Length: | 240 | Identity: | 81/240 - (33%) |
---|---|---|---|
Similarity: | 124/240 - (51%) | Gaps: | 9/240 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 347 CCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSPR----- 406
Fly 407 -CAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEMFAPKCNGCN 470
Fly 471 RAIMENYISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSLCAGCSKPITGR 535
Fly 536 CITAMFKKFHPEHFVCAFCLKQLN-KGTFKEQKDKPYCHTCFDKI 579 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pax | NP_001033913.1 | LIM1_Paxillin_like | 348..400 | CDD:259830 | 19/51 (37%) |
LIM2_Paxillin_like | 407..458 | CDD:188723 | 14/50 (28%) | ||
LIM3_Paxillin_like | 466..518 | CDD:188724 | 22/51 (43%) | ||
LIM4_Paxillin | 525..576 | CDD:188795 | 16/51 (31%) | ||
LIMS1 | NP_001358423.1 | LIM1_PINCH | 72..130 | CDD:188717 | |
LIM2_PINCH | 133..184 | CDD:188718 | 19/51 (37%) | ||
LIM3_PINCH | 197..247 | CDD:188719 | 14/50 (28%) | ||
LIM4_PINCH | 253..306 | CDD:188720 | 22/52 (42%) | ||
LIM5_PINCH | 314..367 | CDD:188721 | 17/52 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1593918at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000055 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X39 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |