Protein Alignment Pax and Mical2

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: XP_038941120.1
• Gene: Mical2 / 365352
• RGDID: 1311773
• Length: 1103
• Species: Rattus norvegicus
• Alignment Length: 480
• Identity: 92/480 - (19%)
• Similarity: 150/480 - (31%)
• Gaps: 172/480 - (35%)

  Fly     1 MDRTMYGKIDPGARQPYR--------TARSKGIL------PGYALLADLQNSVPGQPQQPQPQYG 51
            |...:..|.:...|.|..        :...|.:|      ||.:....|:.|.|..|...:.|:.
  Rat   716 MANQLLAKFEENTRNPSALKQDCPRVSGMGKPVLCSASRPPGTSHCPKLEESTPRLPPPLKRQFS 780

  Fly    52 TVQPKHQALQQQQFVDNTPGYGSLRGKAQPQVYQEHYSVETRSPTAGHDFNGSSTTPGYANQGSL 116
            :.....|.|::   ::..|..|...|:.        :....:|         .....|..|..:|
  Rat   781 STVATGQVLRE---LNQVPASGECPGRP--------WRARAKS---------DLQLGGAENLATL 825

  Fly   117 PRQAAGASTGLSELDSLLQDLQKIDVPV------NYSTPVSKYNTMNSYATVEER---------- 165
            |....||..    |..:|:.||:::..|      |.:.  .:::|.|    ::|:
  Rat   826 PPTCQGALA----LSGVLRRLQQVEEKVLQKRAQNLAN--REFHTKN----IKEKAAHLASMFGH 880

  Fly   166 ---PSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTITVRETKTEKLTGPDGPVGTVEEQIVQQ 227
               |....|.|.:.:||..:.|  |...||.|.               ..|..|..
  Rat   881 GDLPQDKLLSKRVPHAHPPSPP--SCLPSPDPA---------------AAPSPPAA--------- 919

  Fly   228 KDSYTPNHAVPGQQVHQAYTSQATKELDDLMASLSDFKVSNGTNGIGNGSHPQQHSSTVQHQTVT 292
             ||.:|                |.|        |:..|||   :|||..:....:.....|:..|
  Rat   920 -DSVSP----------------ARK--------LTVGKVS---SGIGAAAEVLVNLYLNDHRPKT 956

  Fly   293 DYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQGVNTVQKGCCNACEKPI-V 356
            ....|:                 :|..|:.:....||.              :..|..|:|.: |
  Rat   957 QATSPD-----------------LESLRKAEFPLSLGG--------------RDTCYFCKKRVYV 990

  Fly   357 GQVITALGKTWHPEHFTCNHCSQELGTRNF-FERD-GFPYCEPDYHNLFSPRCAYCNGAILDKCV 419
            .:.::|.|..:|.|.|.|:.|:..|....: |:.| |..||:..:        |:|
  Rat   991 MERLSAEGHFFHRECFRCSVCAAILRVAAYAFDCDEGKFYCKLHF--------AHC--------- 1038

  Fly   420 TALDKTWHTEHFFCAQCGQQFGEEG 444
                ||...:....|:..||..|||
  Rat  1039 ----KTSSKQRKRRAELNQQREEEG 1059

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	17/54 (31%)
		LIM2_Paxillin_like	407..458	CDD:188723	10/38 (26%)
		LIM3_Paxillin_like	466..518	CDD:188724
		LIM4_Paxillin	525..576	CDD:188795
Mical2	XP_038941120.1	FAD_binding_3	87..>274	CDD:396193
		CH_MICAL2	514..623	CDD:409099
		LIM_Mical	981..1035	CDD:188823	17/53 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910