Protein Alignment Pax and Fblim1

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: XP_008762495.1
• Gene: Fblim1 / 362650
• RGDID: 1359551
• Length: 552
• Species: Rattus norvegicus
• Alignment Length: 468
• Identity: 94/468 - (20%)
• Similarity: 157/468 - (33%)
• Gaps: 165/468 - (35%)

  Fly    89 SVETRSPTAGHDFNGSSTTPGYANQGSLPRQAAGASTG--------LSELDSLLQDLQKIDVPVN 145
            ::.|::|.|....:..:.||......|||......|.|        |:|     :||..:..|
  Rat   221 TLPTKTPGAAVGRSPKTWTPSGRTTASLPEVPPQLSNGGCSLPPPPLNE-----EDLDLLPPP-- 278

  Fly   146 YSTPVSKYNTMNSYATVEERPSV---DSLLKELDNAHIYAVPNGSAHKSPTPGRHV---TITVRE 204
             ..|.|.|..:     .||.|.|   .||:.:|:..|:...|.....::|:.|..|   .:.||.
  Rat   279 -PPPPSAYLPL-----PEEEPPVVPGSSLISDLEQLHLPPPPPPPLLQAPSKGSSVQPQPVQVRP 337

  Fly   205 TKTEKLTGPDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQATKELDDLMASLSDFKVSNG 269
            ::.|....|:.||
  Rat   338 SEEELPPPPEEPV---------------------------------------------------- 350

  Fly   270 TNGIGNGSHPQQHSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQAN 334
                   :.|::.:||
  Rat   351 -------TLPEREAST------------------------------------------------- 359

  Fly   335 MSRQGVNTVQKGCCNACEKPIVGQ--VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEP 397
                       ..|..|.||:..:  .:.|:.:.:|.:.|||..|.::|..:.|:::||.|.|||
  Rat   360 -----------DVCGFCHKPVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQRFYQKDGRPLCEP 413

  Fly   398 DYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFH-ERDGKPYCRNDYFEM 461
            .|.:... :|..|...:.:..:.||.|.:|...|.|..|.:...:|.|. :...:.||..|::..
  Rat   414 CYQDTLE-KCGKCGEVVQEHVIRALGKAFHPPCFTCVTCARCISDESFALDNQNQVYCVTDFYRK 477

  Fly   462 FAPKCNGCNRAIMEN------YISALNSQWHPDCFVCRDCR-----QPFQGGSFFDHEGLPYCET 515
            |||.|:.|...|:..      .|..:...:|.:|:.|.||.     :|...|.:..::.| :|:.
  Rat   478 FAPVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCSVLLSVEPTDQGCYPLNDHL-FCKP 541

  Fly   516 HYHAKRGSLCAGC 528
             .|.||.:  |||
  Rat   542 -CHMKRSA--AGC 551

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	18/53 (34%)
		LIM2_Paxillin_like	407..458	CDD:188723	13/51 (25%)
		LIM3_Paxillin_like	466..518	CDD:188724	13/62 (21%)
		LIM4_Paxillin	525..576	CDD:188795	3/4 (75%)
Fblim1	XP_008762495.1	LIM	<357..415	CDD:295319	20/117 (17%)
		LIM2_FBLP-1	422..474	CDD:188758	13/51 (25%)
		LIM3_Zyxin_like	482..543	CDD:188743	13/62 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X39
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910