DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Pax and CG5708

DIOPT Version :9

Sequence 1:	NP_001033913.1	Gene:	Pax / 35215	FlyBaseID:	FBgn0041789	Length:	581	Species:	Drosophila melanogaster
Sequence 2:	NP_001285799.1	Gene:	CG5708 / 34361	FlyBaseID:	FBgn0032196	Length:	241	Species:	Drosophila melanogaster

Alignment Length:	248	Identity:	54/248 - (21%)
Similarity:	85/248 - (34%)	Gaps:	54/248 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   277 SHPQQHSSTVQH-QTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQGV 340
            :|.|..||.... ..|.||...|      |...|:|..:.:..|:...:|....:.. |......
  Fly    14 AHHQDSSSPENFAPIVIDYRNSN------HTKDTVETNSNISSSQLSFMDESSNDFN-NQQLIHS 71

  Fly   341 NTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCS---QELGTRNFFERDGFPYCEPDYHNL 402
            |::.|.|....:|.....::.||.:.||.....|:.|.   .|:|: :.|.|.|...|:.||.::
  Fly    72 NSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGS-SCFTRRGLILCKKDYSSM 135

  Fly   403 FSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEMFAPKCN 467
            |.     |:|.                   |:.||:.....                |:.|....
  Fly   136 FG-----CSGV-------------------CSGCGETIPPS----------------ELVAKALT 160

  Fly   468 GCNRAIMEN-YISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLP-YCETHYH 518
            |.|...::| ....:|..:|..||.|..|....:.|..:...|.. .||..:|
  Fly   161 GINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGDRYTMLGASLVCEQDWH 213

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	14/54 (26%)
		LIM2_Paxillin_like	407..458	CDD:188723	5/50 (10%)
		LIM3_Paxillin_like	466..518	CDD:188724	13/53 (25%)
		LIM4_Paxillin	525..576	CDD:188795
CG5708	NP_001285799.1	LIM1_LMO4	78..132	CDD:188772	14/54 (26%)
CG5708	NP_001285799.1	LIM	142..212	CDD:413332	18/85 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	47	0.796	Domainoid score	I4515
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910