Protein Alignment Pax and Arhgap28

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: XP_036016523.1
• Gene: Arhgap28 / 268970
• MGIID: 2147003
• Length: 756
• Species: Mus musculus
• Alignment Length: 368
• Identity: 68/368 - (18%)
• Similarity: 117/368 - (31%)
• Gaps: 142/368 - (38%)

  Fly    48 PQYGTVQPKHQALQQQQFVDNTPGYGSLRGKAQPQVYQEHYSVETRSPTA-GH--------DFNG 103
            |..|..:|..:||.::..           |.|.|.....|..:...|..| ||        |..|
Mouse    12 PLGGRGRPSRRALGRRTL-----------GAADPLPELVHVGLGLCSGLARGHAPLRMEVEDSGG 65

  Fly   104 SSTTPGYAN-----QGSLPRQAAGASTGLS--------ELDSLLQDLQKIDVPVNYSTPVSKYNT 155
            ...|..:::     ||:.||.|:.||..||        .::.:|.         |.|.....::.
Mouse    66 VVLTAYHSHARSQPQGAEPRCASRASHPLSRKSIPRCRRINRMLS---------NESLHPPSFSR 121

  Fly   156 MNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTITVRETKTEKLTGPDGPVGTV 220
            .||.|:|:...|::..|:|::                        :::|:.          ||..
Mouse   122 SNSQASVDSSASMEEFLREIE------------------------SIKESS----------VGAS 152

  Fly   221 EEQIVQQKDSYTPNHAVPGQQVHQAYTSQATKELDDLMASLSDFKVSNGTNGIGNGSHPQQHSST 285
            :||        .|..|....:|         |.:|:
Mouse   153 QEQ--------PPTAAAAAAEV---------KPVDE----------------------------- 171

  Fly   286 VQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNL---QANMSRQGVNTVQKGC 347
                          |..:|...|.:..:|::..:.|:...::|..|   ||...::..||..:..
Mouse   172 --------------GELEAEWLQDVGLSTLISGNEEEDGKALLSTLTRTQAAAVKKRYNTYTQTL 222

  Fly   348 CNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERD 390
            ....::| |..|....|.:..|...:|.|.:|..||:.  |:|
Mouse   223 RKKNKQP-VRDVRDIFGVSESPPSDSCEHATQLDGTKE--EKD 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	12/43 (28%)
		LIM2_Paxillin_like	407..458	CDD:188723
		LIM3_Paxillin_like	466..518	CDD:188724
		LIM4_Paxillin	525..576	CDD:188795
Arhgap28	XP_036016523.1	RhoGAP_ARHGAP18	408..619	CDD:239856

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1093
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030