DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pax and DUX5

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_036281.2 Gene:DUX5 / 26581 HGNCID:3083 Length:197 Species:Homo sapiens


Alignment Length:158 Identity:37/158 - (23%)
Similarity:55/158 - (34%) Gaps:44/158 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PGARQPYRTARSKGILPGYALLADLQNSVPGQPQQPQPQYGTVQ-PKHQALQQQQFVDNT-PGYG 73
            |.:..|.::.:.:..||..|||..|.:::|.:.|.|..:...:. |......:..|..|. ||..
Human    10 PASLCPCQSVKFRPGLPEMALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIA 74

  Fly    74 SLRGKAQ------PQV---YQEHYSVE-------------TRSPTAGH----DFNGSSTT----- 107
            :....||      |:|   :|...|.:             .|.|..|.    ...||.|.     
Human    75 TKEELAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRA 139

  Fly   108 ------PGYANQGSLPRQAAGASTGLSE 129
                  ||.|.:..|.|:     |||.|
Human   140 FEKDRFPGIAAREELARE-----TGLPE 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830
LIM2_Paxillin_like 407..458 CDD:188723
LIM3_Paxillin_like 466..518 CDD:188724
LIM4_Paxillin 525..576 CDD:188795
DUX5NP_036281.2 Homeobox 54..99 CDD:306543 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..127 3/25 (12%)
Homeobox 124..177 CDD:306543 12/44 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.