Protein Alignment Pax and rga1

DIOPT Version :10

• Sequence 1: NP_523601.2
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: NP_596743.1
• Gene: rga1 / 2541022
• PomBaseID: SPBC3F6.05
• Length: 1150
• Species: Schizosaccharomyces pombe
• Alignment Length: 311
• Identity: 82/311 - (26%)
• Similarity: 130/311 - (41%)
• Gaps: 74/311 - (23%)

  Fly   191 SPTPGRHVTITVRETKTEKLTGPDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQATKELD 255
            ||||.:.:.:..|:.|.|                   ::|.|.|..      |..:||...
pombe    19 SPTPPKRIPVPSRQNKIE-------------------ENSTTKNFP------HSRHTSTVA---- 54

  Fly   256 DLMASLSDFKVSNGTNGIGNGSHPQQHSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSR 320
                         ||.  |..|..::|:|....:     |.||:        |.:.::.::  ::
pombe    55 -------------GTE--GGSSLSRRHTSAESRK-----ALPNQ--------QQLAQSGLL--NK 89

  Fly   321 EDQLDSMLGNLQANMSRQGVNTVQKG-CCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTR 384
            |:|  ..|.....::..:.|..|... .|.:|.:.|.||.:.|||..:|.|.|.|:.|:..:.::
pombe    90 EEQ--QSLKRSDTSVFPKAVRKVSSSKICASCGQVISGQYVRALGNIYHLECFRCHDCNSLVASK 152

  Fly   385 NFFERDG------FPYCEPDYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFG-E 442
             ||..|.      .|.||.||.......||.|..|:....:|||:|.:|.|||.|:.|...|| .
pombe   153 -FFPIDDPTLNKQVPLCETDYFRRLDLLCASCGMALRGYYITALNKKFHIEHFTCSLCYTVFGPN 216

  Fly   443 EGFHERDGKPYCRNDYFEMFAPKCNGCN----RAIMENYISALNSQWHPDC 489
            :.::|.:||.||...|..:||.:|.||:    |..:|.|.:.::..||..|
pombe   217 DSYYEYEGKVYCHYHYSTLFAARCCGCDGPILRQFVEVYRNGVSQNWHVPC 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_523601.2	LIM1_Paxillin_like	348..400	CDD:259830	20/57 (35%)
		LIM2_Paxillin_like	407..458	CDD:188723	21/51 (41%)
		LIM3_Paxillin_like	466..518	CDD:188724	9/28 (32%)
		LIM4_Paxillin	525..576	CDD:188795
rga1	NP_596743.1	LIM1_Lrg1p_like	116..172	CDD:188777	19/56 (34%)
		LIM2_Lrg1p_like	180..232	CDD:188778	21/51 (41%)
		LIM	485..539	CDD:413332
		RhoGAP_fLRG1	835..1044	CDD:239862