Sequence 1: | NP_001033913.1 | Gene: | Pax / 35215 | FlyBaseID: | FBgn0041789 | Length: | 581 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001380800.1 | Gene: | Pdlim4 / 24915 | RGDID: | 3575 | Length: | 335 | Species: | Rattus norvegicus |
Alignment Length: | 368 | Identity: | 74/368 - (20%) |
---|---|---|---|
Similarity: | 113/368 - (30%) | Gaps: | 121/368 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 88 YSVETRSPT-------AGHDFNGSSTTPGYANQGSLPRQAAGASTGLSELDSLLQDLQKIDVPVN 145
Fly 146 YSTPVSKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTITVRETKTEKL 210
Fly 211 TGPDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQATKELDDLMASLSDFKVSNGTNGIG- 274
Fly 275 ------------NGSH-----PQQHSSTVQHQTVTDYA------------RPNKGSQQAHLTQTI 310
Fly 311 EETTIVEDSREDQLDSMLGNLQANM---------SR-------------QGVNTVQKGCCNACEK 353
Fly 354 PIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCE 396 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pax | NP_001033913.1 | LIM1_Paxillin_like | 348..400 | CDD:259830 | 20/49 (41%) |
LIM2_Paxillin_like | 407..458 | CDD:188723 | |||
LIM3_Paxillin_like | 466..518 | CDD:188724 | |||
LIM4_Paxillin | 525..576 | CDD:188795 | |||
Pdlim4 | NP_001380800.1 | PDZ_signaling | 2..80 | CDD:238492 | 23/122 (19%) |
DUF4749 | 139..235 | CDD:406377 | 16/97 (16%) | ||
LIM_RIL | 260..312 | CDD:188835 | 20/49 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1703 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |