DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax and unc-97

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_508943.3 Gene:unc-97 / 180827 WormBaseID:WBGene00006826 Length:348 Species:Caenorhabditis elegans


Alignment Length:322 Identity:93/322 - (28%)
Similarity:138/322 - (42%) Gaps:71/322 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 LDSMLGNLQANMSRQGVNTVQKGCCNACEK--PIVGQVITALGKTWHPEHFTCNHCSQELGTRNF 386
            :||...::..:::....|.|    |..|..  .:..|::.:.|:.||.|.|.|..|.:......:
 Worm     1 MDSDHNHINGDLAHGFENMV----CVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIY 61

  Fly   387 FERDGFPYCEPDYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGF------ 445
            ||.:|..|||.|:|.||||.|..||..|:.:.:.|::.:||...|.|..|.:|..:.||      
 Worm    62 FEYEGRKYCEHDFHVLFSPCCGKCNEFIVGRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGR 126

  Fly   446 ------HERD----------------------------------------------------GKP 452
                  :||:                                                    |:.
 Worm   127 ALCRECNEREKAAGHGRYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGEL 191

  Fly   453 YCRNDYFEMFAPKCNGCNRAIMENYISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHY 517
            ||...:..|..|.|..|:|.|.|..|:||...||.:.|||..|.:||.|...::.:||||||.|:
 Worm   192 YCLRCHDTMGIPICGACHRPIEERVIAALGKHWHVEHFVCSVCEKPFLGHRHYERKGLPYCEQHF 256

  Fly   518 HAKRGSLCAGCSKPITGRCITAMFKKFHPEHFVCAFCLKQLNKGT-FKEQKDKPYCHTCFDK 578
            |...|:||..|..|..|....|:.|.:..:.|.|:||.|:|::.| |.|...||.|..|:|:
 Worm   257 HKLFGNLCFKCGDPCCGEVFQALQKTWCVKCFSCSFCDKKLDQKTKFYEFDMKPTCKRCYDR 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830 17/53 (32%)
LIM2_Paxillin_like 407..458 CDD:188723 18/114 (16%)
LIM3_Paxillin_like 466..518 CDD:188724 24/51 (47%)
LIM4_Paxillin 525..576 CDD:188795 18/51 (35%)
unc-97NP_508943.3 LIM1_PINCH 21..79 CDD:188717 19/57 (33%)
LIM2_PINCH 82..133 CDD:188718 13/50 (26%)
LIM3_PINCH 146..197 CDD:188719 3/50 (6%)
LIM4_PINCH 203..256 CDD:188720 24/52 (46%)
LIM5_PINCH 264..317 CDD:188721 19/52 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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