Protein Alignment Pax and pin-2

DIOPT Version :9

• Sequence 1: NP_001033913.1
• Gene: Pax / 35215
• FlyBaseID: FBgn0041789
• Length: 581
• Species: Drosophila melanogaster
• Sequence 2: NP_001255672.1
• Gene: pin-2 / 178234
• WormBaseID: WBGene00004030
• Length: 330
• Species: Caenorhabditis elegans
• Alignment Length: 322
• Identity: 74/322 - (22%)
• Similarity: 115/322 - (35%)
• Gaps: 80/322 - (24%)

  Fly   333 ANMSRQGVNTVQKGCCNACEKPI-VGQVITALG-KTWHPEHFTCNHCSQELGTRNFFERDGFPYC 395
            |.:::|..:..:...|..|.:.. :.:....|| .:||...|.|..|...|....:|:.:...||
 Worm     6 AQITKQRNSGKRHRACERCREQFELNEPYFLLGASSWHMRCFLCAQCMDPLVGTTYFQFENRIYC 70

  Fly   396 EPDYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDG---------- 450
            |.|:..|::|.||.||..::.:.|.:.:.::|...|.|.:|......:..:...|
 Worm    71 EHDFKTLYAPVCAKCNEFVIGQVVHSSNNSYHLACFTCDECNVHLNSQIAYRYQGTILCFLCNQK 135

  Fly   451 KP---------------------YCRNDYF----------------------EMFAPK------- 465
            ||                     |..|.|.                      ::|.|:
 Worm   136 KPKMRIYNCNKCKQHVDNSDLLTYQENPYHAYHFKCTTCKKVLESDARTIKDDLFCPRCFDFKCE 200

  Fly   466 -CNGCNRAI---MENYISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSLCA 526
             |..|.:.|   :|..|..:|..||.|.|.|..|.:||.|...::..|..||...:....|..|.
 Worm   201 VCFDCKKVIDPQVEQSIFTMNKHWHTDHFRCATCARPFFGHEHYEKNGKAYCRDDFLELIGHHCF 265

  Fly   527 GCSKPITGRCITAMFKKFHPEHFVCAFCLKQLNKGTFKEQKDK-------PYCHTCF-DKIF 580
            .|.:.:.|..:....|.|.||.:.|..|.|.|:      .|||       |.|..|. :|.|
 Worm   266 ICDRNVGGGMVHVFGKAFCPECYRCRGCDKVLH------YKDKVMELDLMPLCKKCLGNKTF 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	15/53 (28%)
		LIM2_Paxillin_like	407..458	CDD:188723	14/81 (17%)
		LIM3_Paxillin_like	466..518	CDD:188724	18/54 (33%)
		LIM4_Paxillin	525..576	CDD:188795	16/57 (28%)
pin-2	NP_001255672.1	LIM1_PINCH	21..79	CDD:188717	16/57 (28%)
		LIM	82..133	CDD:295319	10/50 (20%)
		LIM	144..195	CDD:295319	5/50 (10%)
		LIM4_PINCH	200..256	CDD:188720	18/55 (33%)
		LIM	264..315	CDD:295319	16/56 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1593918at2759
OrthoFinder	1	1.000	-	-		FOG0000055
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920