Sequence 1: | NP_001033913.1 | Gene: | Pax / 35215 | FlyBaseID: | FBgn0041789 | Length: | 581 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023371.1 | Gene: | alp-1 / 177701 | WormBaseID: | WBGene00001132 | Length: | 1424 | Species: | Caenorhabditis elegans |
Alignment Length: | 429 | Identity: | 123/429 - (28%) |
---|---|---|---|
Similarity: | 180/429 - (41%) | Gaps: | 76/429 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 128 SELDSLLQD----LQKIDVPVNYSTPVSKYNTMNSYATVEERPS-----VDSLLKEL--DNAHIY 181
Fly 182 AVPNGSAHKSPTPGRHVTITVRETKTEKLTGPDGPVGTVEEQIVQQ-----KDSYTPNHAVPGQQ 241
Fly 242 VHQAYTSQATKELDDLMASLSDFKV-SNGTNGIGNGS---HPQQHSS---TVQHQTVTDYARP-- 297
Fly 298 NKGSQQA-------HLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQGVNTVQKG----CCNAC 351
Fly 352 EKPIVGQVITALGKTWHPEHFTC--NHCSQELGTRNFFERDGFPYCEPDYHNLFSPRCAYCNGAI 414
Fly 415 LDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEMFAPKCNGCNRAIM--ENY 477
Fly 478 ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETH 516 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pax | NP_001033913.1 | LIM1_Paxillin_like | 348..400 | CDD:259830 | 21/53 (40%) |
LIM2_Paxillin_like | 407..458 | CDD:188723 | 20/50 (40%) | ||
LIM3_Paxillin_like | 466..518 | CDD:188724 | 18/53 (34%) | ||
LIM4_Paxillin | 525..576 | CDD:188795 | |||
alp-1 | NP_001023371.1 | PDZ_signaling | 5..80 | CDD:238492 | |
DUF4749 | 137..>197 | CDD:292558 | |||
ZM | 137..162 | CDD:128974 | |||
LIM_ALP_like | 220..271 | CDD:188746 | |||
LIM1_Enigma_like_1 | 1251..1304 | CDD:188839 | 21/52 (40%) | ||
LIM | 1312..1363 | CDD:295319 | 20/50 (40%) | ||
LIM3_Enigma_like_1 | 1371..1424 | CDD:188845 | 18/53 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1593918at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000055 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |