DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax and unc-95

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_740934.2 Gene:unc-95 / 173301 WormBaseID:WBGene00006824 Length:350 Species:Caenorhabditis elegans


Alignment Length:65 Identity:29/65 - (44%)
Similarity:41/65 - (63%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 SLCAGCSKPITGRCITAM------FKKFHPEHFVCAFCLKQLN-KGTFKEQKDKPYCHTCFDKIF 580
            ::||.||:.|.|..:||:      .:|||..||:|.:|.|.|| .||::|...|||||.||.|::
 Worm   268 AVCAYCSEEIDGAILTALAPNSERAQKFHTYHFMCTYCQKALNMHGTYREHDLKPYCHDCFYKLY 332

  Fly   581  580
             Worm   333  332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830
LIM2_Paxillin_like 407..458 CDD:188723
LIM3_Paxillin_like 466..518 CDD:188724
LIM4_Paxillin 525..576 CDD:188795 26/57 (46%)
unc-95NP_740934.2 LIM4_Paxillin_like 270..328 CDD:188725 26/57 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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