DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax and AgaP_AGAP000731

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_311266.4 Gene:AgaP_AGAP000731 / 1272320 VectorBaseID:AGAP000731 Length:420 Species:Anopheles gambiae


Alignment Length:319 Identity:72/319 - (22%)
Similarity:102/319 - (31%) Gaps:102/319 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 PDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQATK-ELDDLMASLSDFKVSNGTNGIGN- 275
            |..||..  :.:::..:|..|        :|...|...|| ||....|.:.....:.|:..:|. 
Mosquito    43 PSRPVAV--QDLLEFAESAGP--------IHSMMTMDVTKPELPSAAAGMGGGGGNTGSMSLGGL 97

  Fly   276 -GSHPQQHSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQG 339
             .:.|||.....|.|           |||....|                       |:|.|..|
Mosquito    98 VPTGPQQQQQQQQQQ-----------SQQPQSQQ-----------------------QSNQSVVG 128

  Fly   340 VNTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFS 404
            ...|..|              ...|...||:        |:|                       
Mosquito   129 GGPVGGG--------------GGGGGPPHPQ--------QQL----------------------- 148

  Fly   405 PRCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEG--FHERDGKPYCRNDYFEMFAPK- 465
              ||.|...|.|: .:.|||..||.:...|..|..:.||.|  .:.:.....|:.||..:|... 
Mosquito   149 --CAGCGKHIQDRFLLRALDLLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGNTG 211

  Fly   466 -CNGCNRAI--MENYISALNSQWHPDCFVCRDCRQPF-QGGSFFDHEGLPYCETHYHAK 520
             |..||:.|  .|..:.|.|:.:|.:||.|:.|...| .|..|:..|....||..|..:
Mosquito   212 FCAACNKVIPAFEMVMRARNNVYHLECFACQQCNHRFCVGDKFYLCENKILCEYDYEER 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830 5/51 (10%)
LIM2_Paxillin_like 407..458 CDD:188723 16/53 (30%)
LIM3_Paxillin_like 466..518 CDD:188724 18/54 (33%)
LIM4_Paxillin 525..576 CDD:188795
AgaP_AGAP000731XP_311266.4 LIM1_LMO1_LMO3 149..203 CDD:188774 16/53 (30%)
LIM2_dLMO 213..267 CDD:188776 18/53 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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