DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax and PRIC1_ANOGA

DIOPT Version :9

Sequence 1:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_308221.4 Gene:PRIC1_ANOGA / 1269578 VectorBaseID:AGAP007648 Length:923 Species:Anopheles gambiae


Alignment Length:646 Identity:155/646 - (23%)
Similarity:221/646 - (34%) Gaps:180/646 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QPQQPQPQYGTVQPKHQ-ALQQQQFVDNTP--------------------GYGSLRGKAQPQVY- 84
            |.|||| |.|  .|:|| .|||||..|::|                    |...||....|.:| 
Mosquito    11 QTQQPQ-QNG--HPQHQLMLQQQQQADHSPHHHHHHHVHHATAHAYPYELGRSPLRSPQSPPLYS 72

  Fly    85 --------QEHYSVETRSPTAGH---DFNGSSTT-----PGYANQG---SLPRQAAGASTGLSEL 130
                    |.::|.: :.|||.|   ..:|:.|:     ||....|   ||.....|...|.:..
Mosquito    73 GKPPPPPPQSYHSYQ-QPPTAAHPPVSLSGAPTSMPGMMPGQQPPGMTLSLGGGGGGGGGGSAGD 136

  Fly   131 DSLLQDLQKIDVPVNYSTPVSKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPN-GSAH---KS 191
            ..:|..||.       .:|.......|:.:|....||..|:..:   .|..:.|: ||:|   .|
Mosquito   137 CFMLPPLQP-------QSPDGLSTVTNTSSTATNAPSARSVYPQ---HHQPSYPSIGSSHHPFHS 191

  Fly   192 PTPGRHVTITVRETKTEKLTGPDGPVGTVEEQIVQ-QKDSYTPNHAV-----PGQQVHQAYTSQA 250
            |            .....|.||..|....::|..| |...|:..|.:     |...|..|     
Mosquito   192 P------------ASAAALIGPSMPQHAQQQQQHQMQPHHYSSMHLLGPAGGPPSSVGPA----- 239

  Fly   251 TKELDDLMASLSDFKVSNGTNGIGNGS------------------HPQQHSSTVQHQTVTDY--A 295
              .:..:|.     ...:|..|:|.|:                  |....|.......:.:|  .
Mosquito   240 --SMVGMMG-----PGGHGGGGVGGGAGGIAGGVGGGPGGGMGGGHNYSQSDDDSGCALEEYTWV 297

  Fly   296 RPNKGSQQAHL-TQTIEE------TTIVEDSR-----------------------EDQLDSMLGN 330
            .|.....|.|| ...|.|      .:|.|..|                       |::.:..|.:
Mosquito   298 PPGLRPDQVHLYFSAIPEDKVPYVNSIGERHRVRQLLQQLPPHDNEVRYCHSLTDEERKELKLFS 362

  Fly   331 LQANMSRQGVNTVQK----GCCNAC-EKPIVGQVITALGK-----TWHPEHFTCNHCSQELGTRN 385
            .|......|..||::    ..|..| |....|.::....:     .|||..|.|..|.:.|....
Mosquito   363 AQRKREALGRGTVKQITTTLICERCGECASSGDMMVFASRFEPNTCWHPACFACCVCKELLVDLI 427

  Fly   386 FFERDGFPYCEPDYHNLFSPRCAYCNGAIL-DKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERD 449
            :|.|:...||...:.....|||:.|:..|| |:|..|..:.||.:||.|.:|.:|.|.:.:..||
Mosquito   428 YFHRENRLYCGRHHAETLKPRCSACDEIILADECTEAEGRAWHIKHFACFECDKQLGGQRYIMRD 492

  Fly   450 GKPYCRNDYFEMFAPKCNGCNR--AIMENYISALNSQWH--PDCFVCRDCRQPFQGGSFFDHEGL 510
            |||||.:.:..|||..|:.|:.  .:.:..:|.....||  ..||.|..||....|..|....|.
Mosquito   493 GKPYCLHCFDAMFAEYCDYCSEPIGVDQGQMSHDGQHWHATDQCFACSTCRCSLLGRPFLPRRGE 557

  Fly   511 PYCE---------------THYHAKRGSLCAGCSKPI------TGRCITAMFKKFHPEHFV 550
            .||.               .|..::.....|...:|:      |||     ....|.||.|
Mosquito   558 IYCSIACSKGEPPTPSDEYAHRSSQPSHTAARSPEPLRSPERGTGR-----LSPPHTEHEV 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830 15/57 (26%)
LIM2_Paxillin_like 407..458 CDD:188723 22/51 (43%)
LIM3_Paxillin_like 466..518 CDD:188724 16/70 (23%)
LIM4_Paxillin 525..576 CDD:188795 9/32 (28%)
PRIC1_ANOGAXP_308221.4 PET_Prickle 283..378 CDD:193602 17/94 (18%)
LIM1_Prickle 384..442 CDD:188799 15/57 (26%)
LIM2_Prickle 447..502 CDD:188802 24/54 (44%)
LIM3_Prickle 507..565 CDD:188804 15/57 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X39
TreeFam 00.000 Not matched by this tool.
21.910

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