DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Pax and ablim2

DIOPT Version :9

Sequence 1:	NP_001033913.1	Gene:	Pax / 35215	FlyBaseID:	FBgn0041789	Length:	581	Species:	Drosophila melanogaster
Sequence 2:	XP_031751181.1	Gene:	ablim2 / 100489272	XenbaseID:	XB-GENE-490231	Length:	672	Species:	Xenopus tropicalis

Alignment Length:	238	Identity:	78/238 - (32%)
Similarity:	110/238 - (46%)	Gaps:	19/238 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly   331 LQANMSRQGVNTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYC 395
            :|:.:.:...|.:   .||.|.....|:|:....:.:|.:.|.|..|..:|....||.|.|...|
Frog    12 VQSPLDKPSGNAI---LCNNCGNACKGEVLRVQNRYFHIKCFVCKVCGCDLAQGGFFVRQGDYVC 73

  Fly   396 EPDYHNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQF---------GEEGFHER-DG 450
            ..||..|:..||..|:..|..:.|:||.||:|...|.||.|...|         |:|...:: ..
Frog    74 TQDYQRLYGTRCFSCDEFIEGEVVSALGKTYHPGCFVCAVCRNPFPPGDRVTFNGKECICQKCTM 138

  Fly   451 KPYCRNDYFEMFAPK-CNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYC 513
            .|...:..|.:.|.: |.||...|.... :.||...||..||.|:.|..|.: ..:...:|:|||
Frog   139 SPTAGSGNFCIQALRNCGGCGLEIKNGQSLVALEKHWHLGCFKCKTCGMPLK-AEYISKDGIPYC 202

  Fly   514 ETHYHAKRGSLCAGCSKPITGRCITAMFKKFHPEHFVCAFCLK 556
            ||.||||.|..|..|.|.||||.:.|..|.:||   .||.|::
Frog   203 ETDYHAKFGIKCDHCEKFITGRVLEAGEKHYHP---TCACCVR 242

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	16/51 (31%)
		LIM2_Paxillin_like	407..458	CDD:188723	17/60 (28%)
		LIM3_Paxillin_like	466..518	CDD:188724	19/52 (37%)
		LIM4_Paxillin	525..576	CDD:188795	14/32 (44%)
ablim2	XP_031751181.1	LIM1_abLIM	26..77	CDD:188713	15/50 (30%)
		LIM2_abLIM	82..137	CDD:188714	17/54 (31%)
		LIM3_abLIM	155..206	CDD:188715	19/51 (37%)
		LIM4_abLIM	214..269	CDD:188716	14/32 (44%)
		AbLIM_anchor	278..636	CDD:406566
		VHP	637..672	CDD:128458
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910