DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17544 and acadvl

DIOPT Version :9

Sequence 1:NP_001163015.1 Gene:CG17544 / 35213 FlyBaseID:FBgn0032775 Length:693 Species:Drosophila melanogaster
Sequence 2:NP_997776.1 Gene:acadvl / 573723 ZFINID:ZDB-GENE-030131-899 Length:659 Species:Danio rerio


Alignment Length:720 Identity:144/720 - (20%)
Similarity:235/720 - (32%) Gaps:257/720 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSEDTSFIPDLPSGGPLAVYRKRANFDWKRLRLIFEKEQGLRIKYKVWRRLENDPLFAHPSRTL 65
            :..|.:.|:.:|.  ||.:.:.:..|...|                       ||.|......||
Zfish    99 LNEEQSQFLRELV--GPCSKFFEEVNDPMK-----------------------NDALEKVEEHTL 138

  Fly    66 PMDEQKRLCAMQVNRMKHLDLVPKEIESLSFSAKTKYLMYINEALACYSPSLSVKIALGVGLFNN 130
            ...::.....:|         ||.::..:..: .|:|...: |.:..:.        ||||:...
Zfish   139 QGLKEMGAFGLQ---------VPADLGGVGLT-NTQYARLV-EIVGMHD--------LGVGITLG 184

  Fly   131 AIRAMG---------TEKHQKYIEAAWNREVITCLAITELSHGSNTKSIRTTATYDPTTQEFVIN 186
            |.:::|         .::.:||:......|.|....:||.:.||:..||:|||...|..|.:.:|
Zfish   185 AHQSIGFKGILLFGNPQQKEKYLPKLATGENIAAFCLTEPASGSDAASIKTTAVRSPCGQYYTMN 249

  Fly   187 TPDFEAAKCWVGNLGKTATVAMTFANLYTADGQNHGLHGFLIPIRDPKT------------LLSY 239
                 .:|.|:.| |.||.:...||.               .|::|.||            ..|:
Zfish   250 -----GSKIWISN-GGTAEIFTVFAK---------------TPVKDEKTGEMKDKITAFIVERSF 293

  Fly   240 PGVLVGDIGEKCGLNGIDNGFVVFTNYRIPRDNLLNRTSDVTPEGVYESVFTEPGKVLGAALESF 304
            .||..|...:|.|:...:...|.|.|.|:|.|.:|.                |.|.....|:...
Zfish   294 GGVSSGPPEKKMGIKASNTAEVYFENVRVPADCVLG----------------EVGGGFKVAMNIL 342

  Fly   305 SAGRIGIMQESANTLCSAAVIAVRYSAVRKQFGPERHG--------EEMAILEYQLHQYRIFPYL 361
            :.||.|:....:.|:......||.::|.|.|||.:.|.        ..||:|:|....   ..|:
Zfish   343 NNGRFGMAAALSGTMKGVITKAVDHAANRTQFGNKIHNYGAIQEKMARMAMLQYVTES---MAYM 404

  Fly   362 AAACVQKIATE-ELTSTYMEIIARSQADSNGFDVLTQNAAEIHALISSSKPLITWAARDAIQEAR 425
            .:..:...||| ::.:...:|.|...|                           |...|   |..
Zfish   405 VSGNMDSGATEFQIEAAISKIFASEAA---------------------------WLVTD---ECI 439

  Fly   426 EACGGHGYLQAAKLGQMRTDHDPLCTYEGDNNVLG--------QQASNWLLRQWSAKELETPIGS 482
            :..||.|:::.|.:.::..|......:||.|::|.        |.|.|.|  :...|.|:.|:|:
Zfish   440 QVMGGMGFMKDAGVERVLRDLRIFRIFEGTNDILRLFVALNGFQNAGNQL--KSLQKALKNPLGN 502

  Fly   483 VKFLERRSELLALNYASLAQKTPIASWQFSLRCYEWLLCHLMAKTTAHIEGQLAAGSSKFEARNN 547
            .                                                 |.||...:|...|..
Zfish   503 A-------------------------------------------------GMLAGEITKRAKRRA 518

  Fly   548 SQVAGARELSLAYAEYYALTRYVDHVSTLTVEAPYASVLRLLFDVYAMWLLEKHMTTFYVGGFAA 612
            ...:|.......:.|       ::|...|||:|                 :|:            
Zfish   519 GLGSGLTLQGTVHPE-------LNHSGELTVKA-----------------IEQ------------ 547

  Fly   613 GRDFSAAVRQLLL-------DSCLKLKDVAVSVADAISPPDFALNSVIARADGLL---YENLQNE 667
               |.|.:.:|||       |....||.||....|.     :|:..|::||...|   :.:.|:|
Zfish   548 ---FGAVIEELLLKHGKKIIDEQFVLKRVADCAIDL-----YAMVVVLSRASRSLNQGHSSAQHE 604

  Fly   668 FMTNE 672
            .|..|
Zfish   605 KMLCE 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17544NP_001163015.1 AXO 16..670 CDD:173839 139/701 (20%)
PLN02443 18..687 CDD:178062 139/703 (20%)
acadvlNP_997776.1 VLCAD 77..486 CDD:173850 104/500 (21%)
CaiA 107..478 CDD:224871 101/484 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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