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Protein Alignment CG17544 and Ivd

DIOPT Version :9

Sequence 1:	NP_001163015.1	Gene:	CG17544 / 35213	FlyBaseID:	FBgn0032775	Length:	693	Species:	Drosophila melanogaster
Sequence 2:	NP_062800.1	Gene:	Ivd / 56357	MGIID:	1929242	Length:	424	Species:	Mus musculus

Alignment Length:	466	Identity:	108/466 - (23%)
Similarity:	181/466 - (38%)	Gaps:	125/466 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 LRLIFEKEQGLRIKYKVWRRLENDPLFAHPSRT---LPMD--------EQKRLCAMQVNRMKHLD 85
            :||:     |.|:  ..||...:....|.|.|.   ||:|        |||:| ...:::....:
Mouse     5 IRLL-----GRRV--SSWRLRPSPSPLAVPRRAHSILPVDDDINGLNEEQKQL-RHTISKFLQEN 61

  Fly    86 LVPK--EIES-------------------LSFSAKTKY----LMYINEALACYSPS-LSVKIALG 124
            |.||  ||:.                   |..:|..:|    |.|:...|.....| .|..:.|.
Mouse    62 LAPKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLS 126

  Fly   125 VGLFNN-----AIRAMGTEKHQKYIEAAWNREVITCLAITELSHGSNTKSIRTTATYDPTTQEFV 184
            .|..:|     .:|.....:.:||:....:.|.|..||::|.:.||:..|::..|  :.....:|
Mouse   127 YGAHSNLCVNQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMKLKA--EKKGDHYV 189

  Fly   185 INTPDFEAAKCWVGNLGKTATVAMTFANL-YTADGQNHGLHGFLIPIRDPKTLLSYPGVLVGDIG 248
            :|     ..|.|:.| |..|.:.:.:|.. .||...:.|:..|::.       ...||.......
Mouse   190 LN-----GNKFWITN-GPDADILVVYAKTDLTAVPASRGITAFIVE-------KGMPGFSTSKKL 241

  Fly   249 EKCGLNGIDNGFVVFTNYRIPRDNLLNRTSDVTPEGVYESVFTEPGKVLGAALE----SFSAGRI 309
            :|.|:.|.:...:||.:.::|..|:|::.|    :|||         ||.:.|:    ..:.|.:
Mouse   242 DKLGMRGSNTCELVFEDCKVPAANVLSQES----KGVY---------VLMSGLDLERLVLAGGPL 293

  Fly   310 GIMQESANTLCSAAVI--AVRYSAVRKQFGPERHGEEMAILEYQLHQYRIFPYLAAACVQKIATE 372
            ||||         ||:  .:.|..||:.||.:       |.::||.|                 .
Mouse   294 GIMQ---------AVLDHTIPYLHVREAFGQK-------IGQFQLMQ-----------------G 325

  Fly   373 ELTSTYMEIIARSQADSNGFDVLTQNAAEIHALISSSKPLITWAARDAIQEAREA--C-GGHGYL 434
            ::...|..::|..|...|    :.:...|.|.:......:|.:||..|.|.|.:.  | ||:||:
Mouse   326 KMADMYTRLMASRQYVYN----VAKACDEGHIIPKDCAGVILYAAECATQVALDGIQCLGGNGYI 386

  Fly   435 QAAKLGQMRTD 445
            ....:|:...|
Mouse   387 NDFPMGRFLRD 397

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.