DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17544 and CG7461

DIOPT Version :9

Sequence 1:NP_001163015.1 Gene:CG17544 / 35213 FlyBaseID:FBgn0032775 Length:693 Species:Drosophila melanogaster
Sequence 2:NP_001286611.1 Gene:CG7461 / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster


Alignment Length:638 Identity:132/638 - (20%)
Similarity:225/638 - (35%) Gaps:185/638 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 VPKEIESLSFSAKTKY-----LMYINEALACYSPSLSVKIALGVGLFNNAIRAMG---------T 137
            ||.|...|..: .|:|     ::.:|:              ||:|:...|.:::|         .
  Fly   119 VPSEFGGLGLN-NTQYGRLCAIVGVND--------------LGLGITIGAHQSIGFKGILLYGTP 168

  Fly   138 EKHQKYIEAAWNREVITCLAITELSHGSNTKSIRTTATYDPTTQEFVINTPDFEAAKCWVGNLGK 202
            |:.:||:......:|....|:||.|.||:..|||..|......:.:|:|     .:|.|:.| |.
  Fly   169 EQKEKYLPKVAAEQVYAAFALTEPSSGSDAGSIRCRAVKSADGKHYVLN-----GSKIWISN-GG 227

  Fly   203 TATVAMTFANLYTAD---GQNHGLHGFLIPIRDPKTLL----SYPGVLVGDIGEKCGLNGIDNGF 260
            .|.:...||.....|   |:.          :|..|..    |:.||..|...:|.|:...:...
  Fly   228 IAEIMTVFAQTEQVDPKTGEK----------KDKVTAFIVERSFGGVTNGPPEKKMGIKASNTAE 282

  Fly   261 VVFTNYRIPRDNLLNRTSDVTPEGVYESVFTEPGKVLGAALESFSAGRIGIMQESANTLCSAAVI 325
            |.|.:.:||.:|:|.:..|                ....|:...:.||.|:....:.|:......
  Fly   283 VYFEDVKIPIENVLGKEGD----------------GFKVAMNILNNGRFGMGATLSGTMKKCIEQ 331

  Fly   326 AVRYSAVRKQFGP--ERHGEEMAILEYQLHQYRIFPYLAAACVQKIATEELTSTYMEIIARSQAD 388
            |..::..|.|||.  :.:|.    ::.:|.|..|..|         |||.:..|           
  Fly   332 ATEHANNRVQFGQKLKNYGS----IQEKLAQMNILQY---------ATESMAFT----------- 372

  Fly   389 SNGFDVLTQN----AAEIHALISSSKPLITWAARDAIQEAREACGGHGYLQAAKLGQMRTDHDPL 449
                  ::||    :.:.|...:.||...:.:|.....||.:..||.||:....|.::..|....
  Fly   373 ------ISQNMDAGSKDYHLEAAISKIYASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIF 431

  Fly   450 CTYEGDNNVLG--------QQASNWLLRQWSAKELE----TPIGSVKFLERRSELLALNYASLAQ 502
            ..:||.|::|.        |.|.:.|      |||:    .|..::..:.:.:...|.:...|. 
  Fly   432 RIFEGTNDILRLFIALTGIQYAGSHL------KELQRAFKNPSANLGLIFKEASRRAASTVGLG- 489

  Fly   503 KTPIASWQFSLRCYEWLLCHLM------AKTTAHIEGQLAAGSSKFEARNNSQVAGARELSLAYA 561
            .|.::.             |::      ||.|||..........:...|.|..:..         
  Fly   490 GTDLSG-------------HVVGELLPYAKKTAHCIDLFGQSVEELLLRYNKNIVN--------- 532

  Fly   562 EYYALTRYVDHVSTLTVEAPYASVLRLLFDVYAMWLLEKHMTTFYVGGFAAGRDFSAAVRQLLLD 626
            |...|||..:           |::     |:|||.:.:...:.      |...:...|..:|.:.
  Fly   533 EQILLTRLAN-----------AAI-----DIYAMVVTQSRSSR------AVNLNLPTAQHELNMT 575

  Fly   627 SCLKLK---DVAVSVADAISPPDFALN---SVIARADGLLYENLQNEFMTNEG 673
            ..|.::   .|..::..|.|....:||   |.||:.      .|:|..:|..|
  Fly   576 KALTIQASDRVIKNLQAATSSHHRSLNEKISTIAKT------TLENGGVTTTG 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17544NP_001163015.1 AXO 16..670 CDD:173839 130/633 (21%)
PLN02443 18..687 CDD:178062 132/638 (21%)
CG7461NP_001286611.1 VLCAD 45..454 CDD:173850 90/411 (22%)
CaiA 67..446 CDD:224871 89/403 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.