DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17544 and ACADM

DIOPT Version :9

Sequence 1:NP_001163015.1 Gene:CG17544 / 35213 FlyBaseID:FBgn0032775 Length:693 Species:Drosophila melanogaster
Sequence 2:NP_001272972.1 Gene:ACADM / 34 HGNCID:89 Length:454 Species:Homo sapiens


Alignment Length:513 Identity:110/513 - (21%)
Similarity:186/513 - (36%) Gaps:158/513 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VYRKRANFDWK--RLRLIFEKEQGLRIKY-------------KVWRRLENDPLFAHPSRT----L 65
            |.|..:.|.|:  ..:...::|.||...:             :.:.|.|..|:.|...:|    :
Human    11 VLRSISRFHWRSQHTKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPV 75

  Fly    66 PMDEQKRLCAMQVNRMKHLDLVPKEI-ESLSFS------AKTKYLMYINEALACYSPSLSVKI-A 122
            |:          :.|...|.|:...| |:..:|      |.|.||......|...:.:|.:.: .
Human    76 PL----------IRRAWELGLMNTHIPENCDYSVCPLLEACTLYLDAFFLLLTGSNLNLHLNLGG 130

  Fly   123 LGVGLFN---------------------NAIRAM-----GTEKHQKYIEAAWNREVITC-LAITE 160
            ||:|.|:                     |::..|     |.::.:|........|.:.| ..:||
Human   131 LGLGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTE 195

  Fly   161 LSHGSNTKSIRTTATYDPTTQEFVINTPDFEAAKCWVGNLGKTATVAMTFANLYTADGQNHGLHG 225
            ...||:...|:|.|  :....|::||     ..|.|:.|.||        ||.|           
Human   196 PGAGSDVAGIKTKA--EKKGDEYIIN-----GQKMWITNGGK--------ANWY----------- 234

  Fly   226 FLIPIRDP-------KTLLSY------PGVLVG----DIGEKCGLNGIDNGFVVFTNYRIPRDNL 273
            ||:...||       |....:      ||:.:|    ::|::|.    |...:||.:.::|::|:
Human   235 FLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCS----DTRGIVFEDVKVPKENV 295

  Fly   274 LNRTSDVTPEGVYESVFTEPGKVLGAALESFSAGRIGIMQESANTLCSAAVIAVRYSAVRKQFGP 338
            |  ..|.....|....|.:...|:       :||.:|:.|.:.:.       |.:|:..||.|| 
Human   296 L--IGDGAGFKVAMGAFDKTRPVV-------AAGAVGLAQRALDE-------ATKYALERKTFG- 343

  Fly   339 ERHGEEMAILEYQLHQYRIFPYLAAACVQKIATE---ELTSTYMEIIARSQADSNGFDVLTQNAA 400
            :...|..|| .:.|.:..:...||....|:.|.|   ...:||...||::.|.    |:..|   
Human   344 KLLVEHQAI-SFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAG----DIANQ--- 400

  Fly   401 EIHALISSSKPLITWAARDAIQEAREACGGHGYLQAAKLGQMRTDHDPLCTYEGDNNV 458
                           .|.||:|    ..||:|:.....:.::..|......|||.:.:
Human   401 ---------------LATDAVQ----ILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQI 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17544NP_001163015.1 AXO 16..670 CDD:173839 110/513 (21%)
PLN02443 18..687 CDD:178062 110/513 (21%)
ACADMNP_001272972.1 CaiA 39..453 CDD:224871 103/485 (21%)
MCAD 41..451 CDD:173846 103/483 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.