DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17544 and Gcdh

DIOPT Version :9

Sequence 1:NP_001163015.1 Gene:CG17544 / 35213 FlyBaseID:FBgn0032775 Length:693 Species:Drosophila melanogaster
Sequence 2:NP_001038209.2 Gene:Gcdh / 270076 MGIID:104541 Length:447 Species:Mus musculus


Alignment Length:472 Identity:90/472 - (19%)
Similarity:171/472 - (36%) Gaps:134/472 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RANFDWKRLRLIFEKEQGLRIKYKVWRRLENDPLFAHPSRT----LPMDEQKRLCAMQV------ 78
            |..||||                        |||......|    |..|..:..|..::      
Mouse    54 RPVFDWK------------------------DPLILEEQLTADEKLIRDTFRNYCQERLMSRILL 94

  Fly    79 ---NRMKHLDLVPK-----------------EIESLSFSAKTKYLMYINEALACYSPSLSVKIAL 123
               |.:.|.|:|.:                 .:.|:::...|:.|..::..   |...:||:.:|
Mouse    95 ANRNEVFHRDIVYEMGELGVLGPTIKGYGCAGVSSVAYGLLTRELERVDSG---YRSMMSVQSSL 156

  Fly   124 GVGLFNNAIRAMGT-EKHQKYIEAAWNREVITCLAITELSHGSNTKSIRTTATYDPTTQEFVINT 187
            .:    :.|...|: |:.|||:......|::.|..:||.:|||:...:.|.|.::|:.|.:.:: 
Mouse   157 VM----HPIYTYGSEEQRQKYLPGLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLS- 216

  Fly   188 PDFEAAKCWVGNLGKTATVAMTFANLYTADGQNHGLHGFLIPIRDPKTLLSYPGVLVGDIGEKCG 252
                ..|.|:.|    :.||..|  :..|..:::.:.||::.       ....|:....|..|..
Mouse   217 ----GTKTWITN----SPVADLF--IVWARCEDNCIRGFILE-------KGMRGLSAPRIEGKFS 264

  Fly   253 LNGIDNGFVVFTNYRIPRDNLLNRTSDVTPEGVYESVFTEPGKVLGAALESFSAGRIGIMQESAN 317
            |.....|.::..:..:|.:|:|...|.:          ..|...|..|....:.|.:|..:...:
Mouse   265 LRASATGMIIMDSVEVPEENVLPNVSSL----------AGPFGCLNTARYGITWGVLGAAEFCLH 319

  Fly   318 TLCSAAVIAVRYSAVRKQFGPERHGEEMAILEYQLHQYRIFPYLAA------ACVQKIATEELTS 376
            |       |.:|:..|.|||       :.:...||.|.::...|..      ||:|....::...
Mouse   320 T-------ARQYALDRIQFG-------VPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDK 370

  Fly   377 TYMEIIARSQADSNGFDVLTQNAAEIHALISSSKPLITWAARDAIQEAREACGGHGYLQAAKLGQ 441
            ...|:::..:.::.|                        .|.|..::||:..||:|......:.:
Mouse   371 ATPEMVSMLKRNNCG------------------------KALDIARQARDILGGNGISDEYHVIR 411

  Fly   442 MRTDHDPLCTYEGDNNV 458
            ...:.:.:.||||.:::
Mouse   412 HAMNLEAVNTYEGTHDI 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17544NP_001163015.1 AXO 16..670 CDD:173839 90/472 (19%)
PLN02443 18..687 CDD:178062 90/472 (19%)
GcdhNP_001038209.2 GCD 57..443 CDD:173840 89/469 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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