DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17544 and Acadl

DIOPT Version :9

Sequence 1:NP_001163015.1 Gene:CG17544 / 35213 FlyBaseID:FBgn0032775 Length:693 Species:Drosophila melanogaster
Sequence 2:NP_036951.1 Gene:Acadl / 25287 RGDID:2011 Length:430 Species:Rattus norvegicus


Alignment Length:349 Identity:69/349 - (19%)
Similarity:126/349 - (36%) Gaps:60/349 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 CYSPSLSVKIALGVGLFNNAIRAMGT-EKHQKYIEAAWNREVITCLAITELSHGSNTKSIRTTAT 175
            |..|..|:...:.:....|    .|| |:.:::|......:.|..:|:||...||:.:.:||.| 
  Rat   129 CTGPGFSLHSDIVMPYIAN----YGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNA- 188

  Fly   176 YDPTTQEFVINTPDFEAAKCWVGNLGKTATVAMTFANLYTADGQNHGLHGFLIPIRDPKTLLSYP 240
             ..:..::::|.........|:.:|  ...||:|...   |....||:..||:.       ....
  Rat   189 -KRSGSDWILNGSKVFITNGWLSDL--VIVVAVTNRE---ARSPAHGISLFLVE-------NGMK 240

  Fly   241 GVLVGDIGEKCGLNGIDNGFVVFTNYRIPRDNLLNRTSDVTPEGVYESVFTEPGKVLGAALESFS 305
            |.:.|....|.|:...|...:.|.:.|:|...||...:    :|.|..:...|.:.|..|..:.|
  Rat   241 GFIKGKKLHKMGMKAQDTAELFFEDVRLPASALLGEEN----KGFYYLMQELPQERLLIADLAIS 301

  Fly   306 AGRIGIMQESANTLCSAAVIAVRYSAVRKQFGPERHGEEMAILEYQLHQYRIFPYLAAACVQKIA 370
            |... :.:|:.|           |...||.||       ..:...|..|:::.......||    
  Rat   302 ACEF-MFEETRN-----------YVRQRKAFG-------KTVAHIQTVQHKLAELKTNICV---- 343

  Fly   371 TEELTSTYMEIIARSQADSNGFDVLTQNAAEIHALISSSKPLITWAARDAIQEAREACGGHGYLQ 435
            |.....:.:::....:.||....:....|:|:...::              .:..:..||.||:.
  Rat   344 TRAFVDSCLQLHETKRLDSASASMAKYWASELQNTVA--------------YQCVQLHGGWGYMW 394

  Fly   436 AAKLGQMRTDHDPLCTYEGDNNVL 459
            ...:.:...|......|.|.|.::
  Rat   395 EYPIAKAYVDARVQPIYGGTNEIM 418

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG17544NP_001163015.1 AXO 16..670 CDD:173839 69/349 (20%)
PLN02443 18..687 CDD:178062 69/349 (20%)
AcadlNP_036951.1 CaiA 53..427 CDD:224871 69/349 (20%)
LCAD 56..427 CDD:173849 69/349 (20%)