DRSC/TRiP Functional Genomics Resources

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Protein Alignment fon and NUP145

DIOPT Version :10

Sequence 1:NP_609959.1 Gene:fon / 35211 FlyBaseID:FBgn0032773 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_011423.1 Gene:NUP145 / 852788 SGDID:S000003060 Length:1317 Species:Saccharomyces cerevisiae


Alignment Length:423 Identity:89/423 - (21%)
Similarity:145/423 - (34%) Gaps:107/423 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SFHSRHYSTHGQAVEQARKNAGYGGGYSGSFG-AGVD-GASAQVDDSALGKLESSYDSVG---AT 88
            :|.:::.||......|...:..:....:|.|| ..|: ..|.......|....|:.:|:.   |.
Yeast    11 TFGNQNTSTPTSTPAQPSSSLQFPQKSTGLFGNVNVNANTSTPSPSGGLFNANSNANSISQQPAN 75

  Fly    89 ESAEG----ASAGGLGGAVETLGGSAGTNTIGAGVGSSFGSNFASGFGGQNAASFGAQNAAGFGA 149
            .|..|    ..:|||.||.        .||.....||.||:|        ||.:....:...|..
Yeast    76 NSLFGNKPAQPSGGLFGAT--------NNTTSKSAGSLFGNN--------NATANSTGSTGLFSG 124

  Fly   150 QNAASFGAQNAASFGSSFSSNAAFQTSSASNFGSTAAHQVGSNVEFADNANAGNKVDFGGVNAVD 214
            .|..:...||...||:|.::|....|.:...||.......|:...|.::::..:.....|.|...
Yeast   125 SNNIASSTQNGGLFGNSNNNNITSTTQNGGLFGKPTTTPAGAGGLFGNSSSTNSTTGLFGSNNTQ 189

  Fly   215 SS---------AQLLSGV------------QTVQSVPTSEYYRHEKIVSTPQQVVYTIPGGSQRY 258
            ||         |....|:            :|..::.|:.|  ...|.:.|..|           
Yeast   190 SSTGIFGQKPGASTTGGLFGNNGASFPRSGETTGTMSTNPY--GINISNVPMAV----------- 241

  Fly   259 VHHEERIVEQPTQVTQTV------------PVQTAHYYQRKVTTTASAPQLVQPVAS-----SRL 306
                   .:.|..:|.::            |::....|....:.:.:||   .|:||     |||
Yeast   242 -------ADMPRSITSSLSDVNGKSDAEPKPIENRRTYSFSSSVSGNAP---LPLASQSSLVSRL 296

  Fly   307 ------TYGSNAASTFGSNAASNFGSNAA------TNFGSNAATNFGSNAAFNSQFGSSYGQNF- 358
                  |..|.:.:...|.:.|....|.|      .:|.|:..|:...|.  ||.|..: |.|| 
Yeast   297 STRLKATQKSTSPNEIFSPSYSKPWLNGAGSAPLVDDFFSSKMTSLAPNE--NSIFPQN-GFNFL 358

  Fly   359 -QQNSQLSQL----LSQTQQAARQQAALQAASA 386
             .|.:.|::|    :...:.||::...|....|
Yeast   359 SSQRADLTELRKLKIDSNRSAAKKLKLLSGTPA 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fonNP_609959.1 None
NUP145NP_011423.1 Nucleoporin_FG 34..122 CDD:463941 25/103 (24%)
Nucleoporin_FG 89..209 CDD:463941 32/135 (24%)
Nucleoporin2 460..605 CDD:461171
Nup96 898..1150 CDD:463462
Blue background indicates that the domain is not in the aligned region.

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