DRSC/TRiP Functional Genomics Resources

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Protein Alignment fon and NUP1

DIOPT Version :10

Sequence 1:NP_609959.1 Gene:fon / 35211 FlyBaseID:FBgn0032773 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_187676.1 Gene:NUP1 / 820234 AraportID:AT3G10650 Length:1309 Species:Arabidopsis thaliana


Alignment Length:566 Identity:139/566 - (24%)
Similarity:202/566 - (35%) Gaps:177/566 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GASAQVDDSALGKLE-SSYDSVGATE--------------SAEGASAGGLGGAVETLGG---SAG 111
            ||||.:      ||| :|..:.|.:|              ||.||.:.  ..|..||.|   |||
plant   696 GASADI------KLEKTSSTAFGVSEAWAKPTESKKTFSNSASGAESS--TSAAPTLNGSIFSAG 752

  Fly   112 TNTIGAGVGSSFGSNFASGFGGQNAASFGAQNAAGFGAQNAASFGAQNAAS--FGSSFSSN-AAF 173
            .|.:..  ..|.||..:|.....:.::..:.|:.|.......||.|.:.:|  ||...:|| :..
plant   753 ANAVTP--PPSNGSLTSSPSFPPSISNIPSDNSVGDMPSTVQSFAATHNSSSIFGKLPTSNDSNS 815

  Fly   174 QTSSASNFGSTAAHQVG------------------SNVEFADNANAGN--KVDFGGVNAVDSSAQ 218
            |::|||...||:..:.|                  |......||..||  ...|||:.:.|.|..
plant   816 QSTSASPLSSTSPFKFGQPAAPFSAPAVSESSGQISKETEVKNATFGNTSTFKFGGMASADQSTG 880

  Fly   219 LLSGVQTVQSVPTSEYYRHEKIVSTPQQVV--YTIPGGSQRYVHHEERIVEQPTQVTQTVPVQTA 281
            ::.|.::.::            .|.|..|.  .::.|||                   |:...||
plant   881 IVFGAKSAEN------------KSRPGFVFGSSSVVGGS-------------------TLNPSTA 914

  Fly   282 HYYQRKVTTTASAPQLVQPVASSRLTYGSNAASTFGSNAASNFGSNAATNFGSNAATNFG-SNAA 345
                     .||||:     :|..|.:|..::||.|:..:....|:||||.|::.   || |:.|
plant   915 ---------AASAPE-----SSGSLIFGVTSSSTPGTETSKISASSAATNTGNSV---FGTSSFA 962

  Fly   346 FNSQFGSSYGQ----------NFQQNSQLSQLLSQTQQAARQQAALQAASANQVQAGSGYAAGSQ 400
            |.|...|..|.          .|...|..|...||: ||:....|..|.:.|   .|||....:|
plant   963 FTSSGSSMVGGVSASTGSSVFGFNAVSSASATSSQS-QASNLFGAGNAQTGN---TGSGTTTSTQ 1023

  Fly   401 G------------GFN-SGYNSAFNSGSQFGFNSA-------------SSLNSASSLNSA----- 434
            .            .|. ||.:|..::.|.|||:.:             ||.||::|.:|.     
plant  1024 SIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFSKSEPAVFTSVSTPQLSSTNSSASSSSTMSSPL 1088

  Fly   435 ---------STGNSAALLSGSL----------LGGSQGSLLSGQVGGQQSLLSGSLLSGQQNLGL 480
                     |:.||..:.|.|.          .|||..:.:|..........:.:..|.....|.
plant  1089 FGTSWQAPNSSPNSGPVFSSSFTTSSTPTTFSFGGSSAATVSSTTTPIFGASTNNTPSPSPIFGF 1153

  Fly   481 GLNAAQTGQ--VVGASSVGA---------GLSAGAGNLGSGYRTKQ 515
            |.....|.|  |.|.|...:         |.:.||.|.|:|....|
plant  1154 GSTPPTTPQQPVFGNSGTPSQSLFGNSTPGFAFGAPNNGNGINNNQ 1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fonNP_609959.1 None
NUP1NP_187676.1 PPE <816..1052 CDD:444372 69/287 (24%)

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