DRSC/TRiP Functional Genomics Resources

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Protein Alignment fon and Nup58

DIOPT Version :10

Sequence 1:NP_609959.1 Gene:fon / 35211 FlyBaseID:FBgn0032773 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_650821.2 Gene:Nup58 / 42342 FlyBaseID:FBgn0038722 Length:546 Species:Drosophila melanogaster


Alignment Length:515 Identity:101/515 - (19%)
Similarity:157/515 - (30%) Gaps:196/515 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DSVGATESAEGASAGGLGGAVET-----LGGSAGTNTIGAGVGSSFGSNFAS-----GFGGQNAA 137
            :::|...:|.||.|.|...|..|     .|.:..|.|.||...::  |.||:     .||...|.
  Fly     8 NAIGGATAATGAFAFGARPATTTAPPPSFGAATSTPTFGAAPATT--SLFAAPAATPAFGAPAAT 70

  Fly   138 -SFGA-QNAAGFGAQNAASFGAQNAASFGSSFSSNAAFQTSSASNFGSTAAHQVGSNVEFADNAN 200
             :||| .:..||||.:.|      |.:||::.::.|....::.|.||:.||...           
  Fly    71 PAFGAPASTPGFGATSTA------APAFGTAAATPAFGIPAATSAFGAPAATPA----------- 118

  Fly   201 AGNKVDFGGVNAVDSSAQLLSGVQTVQSVPTSEYYRHEKIVSTPQQVVYTIPGGSQRYVHHEERI 265
                  ||...|                              ||   .:..|..:..:       
  Fly   119 ------FGAAAA------------------------------TP---AFGAPAATPAF------- 137

  Fly   266 VEQPTQVTQTVPVQTAHYYQRKVTTTASAPQLVQPVASSRLTYGSNAASTFGSNAAS-------- 322
                     ..|..|:.:.....||...||             .|..||.||:.|.:        
  Fly   138 ---------GAPAATSAFGAPAATTAFGAP-------------ASTQASAFGAPAPAVGTVAPTF 180

  Fly   323 NFGSNA---------ATNFGSNAATNFGSNAAFNSQFGSSYGQNFQQNSQLSQLLSQTQQAARQQ 378
            :|.:.|         |..||:.|.|   :.||..:...|..|.......|               
  Fly   181 SFATPATSAPTTAPPAFGFGTTATT---AAAAMPASLSSGIGSFSFPKPQ--------------- 227

  Fly   379 AALQAASANQVQAGSGYAAGSQGGFNSGYNSA----FNSGSQFGFNSASSLNSASSLNSASTGNS 439
             |..|||.|               ||:...:|    ||:|.:.|..:|::......:.|...|.:
  Fly   228 -ATTAASLN---------------FNTTTTTATAQPFNTGLKLGTTNATTTLGGGGIFSKPAGQA 276

  Fly   440 AALLSGSLLGGSQGSLLSGQVGGQQSLLSGSLLSGQQNLGL----------------GLNAAQTG 488
            ||..:.:.:|          :||.....:...|...:..|:                ||.|....
  Fly   277 AAPAASTFVG----------LGGIDVTATQPKLGDNKQDGIKIKETQVPDEIIKTVDGLKAYIKQ 331

  Fly   489 QVVGASSVGAGLSAGAGNLGSGYRTKQWEKQSKWSSQNSYDSNGHVNNYKDLVTGESESV 548
            |...:|.:|...::...|:.......:|..|                |...||.|.::.:
  Fly   332 QKTISSDIGRTSTSKFTNVSHEITNLKWALQ----------------NMATLVEGSNQQI 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fonNP_609959.1 None
Nup58NP_650821.2 PHA03247 <25..195 CDD:223021 50/256 (20%)
Nucleoporin_FG2 136..>525 CDD:435043 59/329 (18%)

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