DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnt and Fgfr3

DIOPT Version :10

Sequence 1:NP_477341.2 Gene:dnt / 35207 FlyBaseID:FBgn0024245 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_006251454.1 Gene:Fgfr3 / 84489 RGDID:620714 Length:803 Species:Rattus norvegicus


Alignment Length:529 Identity:144/529 - (27%)
Similarity:225/529 - (42%) Gaps:84/529 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VPANVKDISFTWQSLAGRGLPYSINVVSSDQ---EVLPRPAINVSHSGEIPTTIQTWSIALKCSG 146
            :|||       ..::.|..:.:...|.|..|   :.|....:|.|..|...|...|   .||...
  Rat   253 LPAN-------QTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVT---VLKSWI 307

  Fly   147 LKAAEVDVTVSLEVVLNRS----LNNVTHLVFRRKKICLMNDSAEDLSEDVDDPQLLETVMLPPT 207
            .:..|.|..:.|..|..|.    |...|:.:...:|...:.         |..||..|..::...
  Rat   308 SENVEADARLRLANVSERDGGEYLCRATNFIGVAEKAFWLR---------VHGPQAAEEELMEVD 363

  Fly   208 GLITLVVGV-SVAMGSVCLLLMIAYCV---------KGAANKRQHHQHGGQPMRTSSF--QRLNT 260
            ...::..|| |..:|....:|::|...         ||..:...|        :.|.|  :|...
  Rat   364 EAGSVYAGVLSYGVGFFLFILVVAAVTLCRLRSPPKKGLGSPTVH--------KVSRFPLKRQQV 420

  Fly   261 HPPCQSSMGSAAYMTPSI-IAPIHGSSLPRKVPVSVEQQHPEELHRRISELTVERCRVRLSSLLQ 324
            .....|||.|   .||.: ||.:.....|....|| |.:.|.:....:|     |.|:.|...|.
  Rat   421 SLESNSSMNS---NTPLVRIARLSSGEGPVLANVS-ELELPADPKWELS-----RTRLTLGKPLG 476

  Fly   325 EGTFGRVYR----GTYNDTQ----DVLVKTVAQHASQMQVLLLLQE-GMLLYGASHPGILSVLGV 380
            ||.||:|..    |...|..    .|.||.:...|:...:..|:.| .|:.....|..|:::||.
  Rat   477 EGCFGQVVMAEAIGIDKDRTAKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 541

  Fly   381 SIEDHTTPFVL--YPALNNTRNLKQFL-------LD---PAC---ARTVTTIQIVMMASQLSMAL 430
            ..:.... :||  |.|..   ||::||       :|   .||   ...:|...:|..|.|::..:
  Rat   542 CTQGGPL-YVLVEYAAKG---NLREFLRARRPPGMDYSFDACRLPEEQLTCKDLVSCAYQVARGM 602

  Fly   431 DHLHSHGVVHKDIATRNCVIDDQLRVKLSDSSLSRDLFPSDYNCLGDSENRPVKWMSLEALQHKQ 495
            ::|.|...:|:|:|.||.::.:...:|::|..|:||:...||.....:...|||||:.|||..:.
  Rat   603 EYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRV 667

  Fly   496 FSEASDSWAFGVLMWELCTSAKQPYAEVDPFEMEHYLKDGYRLAQPFNCPDELFTIMAYCWALLP 560
            ::..||.|:||||:||:.|....||..:...|:...||:|:|:.:|.||..:|:.||..||..:|
  Rat   668 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHDLYMIMRECWHAVP 732

  Fly   561 AERPTFAQL 569
            ::||||.||
  Rat   733 SQRPTFKQL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dntNP_477341.2 WIF 46..182 CDD:128745 23/103 (22%)
Protein Kinases, catalytic domain 310..580 CDD:473864 91/284 (32%)
Fgfr3XP_006251454.1 IG_like 52..123 CDD:214653
Ig strand B 55..59 CDD:409358
Ig strand C 69..73 CDD:409358
Ig strand E 91..94 CDD:409358
Ig strand F 104..108 CDD:409358
IgI_2_FGFR 145..239 CDD:409443
Ig strand A 145..148 CDD:409443
Ig strand A' 156..161 CDD:409443
Ig strand B 165..173 CDD:409443
Ig strand C 179..184 CDD:409443
Ig strand C' 187..189 CDD:409443
Ig strand D 198..201 CDD:409443
Ig strand E 205..210 CDD:409443
Ig strand F 219..226 CDD:409443
Ig strand G 229..239 CDD:409443
IgI_3_FGFR 247..347 CDD:409363 23/103 (22%)
Ig strand A 247..250 CDD:409363
Ig strand A' 254..258 CDD:409363 3/10 (30%)
Ig strand B 266..273 CDD:409363 1/6 (17%)
Ig strand C 277..284 CDD:409363 1/6 (17%)
Ig strand D 299..304 CDD:409363 1/7 (14%)
Ig strand E 315..320 CDD:409363 0/4 (0%)
Ig strand F 328..336 CDD:409363 1/7 (14%)
Ig strand G 339..347 CDD:409363 1/7 (14%)
PTKc_FGFR3 456..789 CDD:173652 93/295 (32%)
Blue background indicates that the domain is not in the aligned region.

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