DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnt and GSO2

DIOPT Version :9

Sequence 1:NP_001260567.1 Gene:dnt / 35207 FlyBaseID:FBgn0024245 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_199283.1 Gene:GSO2 / 834499 AraportID:AT5G44700 Length:1252 Species:Arabidopsis thaliana


Alignment Length:669 Identity:125/669 - (18%)
Similarity:227/669 - (33%) Gaps:213/669 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 WVLSLLALAALQLHSGSEVAA----------HLNVFLN--------PVEVMRLLGVSAEVYYVRE 71
            |:..|..|..|:|.|...|.:          .|.:||:        |.|:..|..::|  ..:.|
plant   667 WLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNA--LNLEE 729

  Fly    72 GHINNYALNFIVPVPANVKDISFTWQ------SLAGRGLPYSINVVSSDQEVLPRPAINVSH--- 127
            ..::.       |:|:.:..:|..::      :|.|. :|..|..:...|.     |:::|:   
plant   730 NQLSG-------PLPSTIGKLSKLFELRLSRNALTGE-IPVEIGQLQDLQS-----ALDLSYNNF 781

  Fly   128 SGEIPTTIQTWSIALKCSGLKAAEVDVTVSLEVVLNRSLNNVTHLVFRRKKICLMNDSAEDLSED 192
            :|.||:||.|         |...|     ||::..|:.:..|...:...|.:..:|.|..:|...
plant   782 TGRIPSTIST---------LPKLE-----SLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGK 832

  Fly   193 -------------VDDPQLL--------------ETVMLPPTGLITLVVGVSVAMGSVCLLLMIA 230
                         |.:..|.              :..:.|.|.:|...:....|:..:.|::::.
plant   833 LKKQFSRWQADAFVGNAGLCGSPLSHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLVIILF 897

  Fly   231 YCVKGAANKRQHHQ-----HGGQPMRTSSFQRLNTHPPCQSSMGSAAYMTPSIIAPIH---GSSL 287
            :        :|:|.     .||    .|:|          ||..|::.      ||:.   |:..
plant   898 F--------KQNHDLFKKVRGG----NSAF----------SSNSSSSQ------APLFSNGGAKS 934

  Fly   288 PRKVPVSVEQQH--PEELHRRISELTVERCRVRLSSLLQEGTFGRVYRGTYNDTQDVLVKTVAQH 350
            ..|....:|..|  .||.                  ::..|..|:||:....:.:.:.||.:...
plant   935 DIKWDDIMEATHYLNEEF------------------MIGSGGSGKVYKAELKNGETIAVKKILWK 981

  Fly   351 ASQMQVLLLLQEGMLLYGASHPGILSVLG----------VSIEDHTTPFVLYPALNNTRNLKQFL 405
            ...|......:|...|....|..::.::|          :.|.::.....::..|:...|.|:  
plant   982 DDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKK-- 1044

  Fly   406 LDPACARTV----TTIQIVMMASQLSMALDHLHSH---GVVHKDIATRNCVIDDQLRVKLSDSSL 463
                  :.|    |.::|   |..|:..:::||..   .:||:||.:.|.::|..:...|.|..|
plant  1045 ------KEVLGWETRLKI---ALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGL 1100

  Fly   464 -------------SRDLFPSDYNCLGDSENRPVKWMSLEALQHKQFSEASDSWAFGVLMWELCTS 515
                         |..:|...|..:.     |....||:|      :|.||.::.|:::.|:.|.
plant  1101 AKILTGNYDTNTESNTMFAGSYGYIA-----PEYAYSLKA------TEKSDVYSMGIVLMEIVTG 1154

  Fly   516 AKQPYAEVDP-----------------FEMEHYLKDGYRLAQPFNCPDE----LFTIMAYCWALL 559
            .....|..|.                 .|....|.|. .|.....|.:|    :..|...|....
plant  1155 KMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDS-ELKSLLPCEEEAAYQVLEIALQCTKSY 1218

  Fly   560 PAERPTFAQLQSCLSEFYS 578
            |.|||:..|....|...::
plant  1219 PQERPSSRQASEYLLNVFN 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dntNP_001260567.1 WIF 46..182 CDD:128745 31/152 (20%)
PKc_like 310..580 CDD:304357 60/320 (19%)
Pkinase_Tyr 317..573 CDD:285015 59/306 (19%)
GSO2NP_199283.1 LRRNT_2 28..68 CDD:285463
leucine-rich repeat 76..96 CDD:275380
LRR_RI 135..406 CDD:238064
LRR_8 145..204 CDD:290566
leucine-rich repeat 146..169 CDD:275380
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..241 CDD:275380
LRR_8 240..300 CDD:290566
leucine-rich repeat 242..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
PLN00113 285..1232 CDD:215061 124/662 (19%)
leucine-rich repeat 290..313 CDD:275380
leucine-rich repeat 314..338 CDD:275380
leucine-rich repeat 339..362 CDD:275380
leucine-rich repeat 363..386 CDD:275380
leucine-rich repeat 387..410 CDD:275380
leucine-rich repeat 411..434 CDD:275380
leucine-rich repeat 435..458 CDD:275380
leucine-rich repeat 459..482 CDD:275380
leucine-rich repeat 483..506 CDD:275380
leucine-rich repeat 507..528 CDD:275380
leucine-rich repeat 531..554 CDD:275380
leucine-rich repeat 555..571 CDD:275380
LRR_RI 603..843 CDD:238064 41/204 (20%)
leucine-rich repeat 604..625 CDD:275380
leucine-rich repeat 626..649 CDD:275380
leucine-rich repeat 650..673 CDD:275380 2/5 (40%)
leucine-rich repeat 674..697 CDD:275380 5/22 (23%)
leucine-rich repeat 698..721 CDD:275380 6/22 (27%)
leucine-rich repeat 722..745 CDD:275380 4/31 (13%)
leucine-rich repeat 746..769 CDD:275380 4/23 (17%)
leucine-rich repeat 770..794 CDD:275380 10/37 (27%)
leucine-rich repeat 795..818 CDD:275380 5/27 (19%)
leucine-rich repeat 819..839 CDD:275380 3/19 (16%)
STKc_IRAK 954..1232 CDD:270968 59/300 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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