DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnt and Fgfr4

DIOPT Version :10

Sequence 1:NP_477341.2 Gene:dnt / 35207 FlyBaseID:FBgn0024245 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_006253668.1 Gene:Fgfr4 / 25114 RGDID:2612 Length:801 Species:Rattus norvegicus


Alignment Length:623 Identity:164/623 - (26%)
Similarity:263/623 - (42%) Gaps:133/623 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESVNKCGKSASTRNCTVKMS----RKMWVLSLLALAALQLHSGSEVAAHLNVFLN--PVEVMRL 59
            ||||  ......|..|.|:.|    |..::|.:|           |.:.|..:...  |.....:
  Rat   207 MESV--VPSDRGTYTCLVENSLGSIRYSYLLDVL-----------ERSPHRPILQAGLPANTTAV 258

  Fly    60 LGVSAE----VYYVREGHINNYALNFIVPVPANVKDISFTWQSLAGRGLPY-----SINVVSSDQ 115
            :|.:.|    ||...:.||.            .:|.|.....|....|.||     :.::.||:.
  Rat   259 VGSNVELLCKVYSDAQPHIQ------------WLKHIVINGSSFGADGFPYVQVLKTTDINSSEV 311

  Fly   116 EVLPRPAINVSHSGEIPTTIQTWSIALKCSGLKAAEVDVTVSLEVVLNRSLNNVTHLVFRRKKIC 180
            |||....::...:||. |.:...||     ||......:||                        
  Rat   312 EVLYLRNVSAEDAGEY-TCLAGNSI-----GLSYQSAWLTV------------------------ 346

  Fly   181 LMNDSAEDLSEDVDDPQLLET-VMLPPTGLITLVVGVSVAMGSVCLLLMIAYCVKGAANKRQ-HH 243
            |.....|||:......:...| ::|..:|.:.||           |||::|    |..:::. |.
  Rat   347 LPEAEEEDLAWTTATSEARYTDIILYVSGSLALV-----------LLLLLA----GVYHRQAIHG 396

  Fly   244 QHGGQPMRTSSFQRLNTHPPC-QSSMGSAAYMTPSIIAPIHGSSLPRKVPVSVEQQHPEELHRRI 307
            .|..||:   :.|:|:..|.. |.|:.|.:....|:       ||.|.|.:|  ...|..|...:
  Rat   397 HHSRQPV---TVQKLSRFPLARQFSLESRSSGKSSL-------SLVRGVRLS--SSGPPLLTGLV 449

  Fly   308 S-ELTVE------RCRVRLSSLLQEGTFGRVYRGTY--------NDTQDVLVKTVAQHASQMQV- 356
            | :|.::      |.|:.|...|.||.||:|.|...        :.|..|.||.:..:||...: 
  Rat   450 SLDLPLDPLWEFPRDRLVLGKPLGEGCFGQVVRAEALGMDSSRPDQTSTVAVKMLKDNASDKDLA 514

  Fly   357 -LLLLQEGMLLYGASHPGILSVLGVSIEDHTTPFVLYPALNNTRNLKQFL---------LDPACA 411
             |:...|.|.|.| .|..|:::|||..::.....::..|...  ||::||         |.|...
  Rat   515 DLISEMEMMKLIG-RHKNIINLLGVCTQEGPLYVIVEYAAKG--NLREFLRARRPPGPDLSPDGP 576

  Fly   412 RT----VTTIQIVMMASQLSMALDHLHSHGVVHKDIATRNCVIDDQLRVKLSDSSLSRDLFPSDY 472
            |:    ::...:|..|.|::..:.:|.|...:|:|:|.||.::.:...:|::|..|:|.:...||
  Rat   577 RSSEGPLSFPALVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDDVMKIADFGLARGVHHIDY 641

  Fly   473 NCLGDSENRPVKWMSLEALQHKQFSEASDSWAFGVLMWELCTSAKQPYAEVDPFEMEHYLKDGYR 537
            .....:...|||||:.|||..:.::..||.|:||:|:||:.|....||..:...|:...|::|:|
  Rat   642 YKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHR 706

  Fly   538 LAQPFNCPDELFTIMAYCWALLPAERPTFAQLQSCLSE 575
            :.:|.|||.||:.:|..||...|::||||.||...|.:
  Rat   707 MERPPNCPSELYGLMRECWHAAPSQRPTFKQLVEALDK 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dntNP_477341.2 WIF 46..182 CDD:128745 28/146 (19%)
Protein Kinases, catalytic domain 310..580 CDD:473864 91/295 (31%)
Fgfr4XP_006253668.1 Ig 33..101 CDD:472250
Ig strand B 50..54 CDD:409549
Ig strand E 81..85 CDD:409549
Ig strand F 95..100 CDD:409549
Ig 143..237 CDD:472250 10/31 (32%)
Ig strand B 164..168 CDD:409443
Ig strand C 177..181 CDD:409443
Ig strand E 203..207 CDD:409443 164/623 (26%)
Ig strand F 217..222 CDD:409443 2/4 (50%)
Ig strand G 230..233 CDD:409443 1/2 (50%)
Ig 245..347 CDD:472250 27/143 (19%)
Ig strand B 263..267 CDD:409444 1/3 (33%)
Ig strand C 276..280 CDD:409444 2/15 (13%)
Ig strand E 312..316 CDD:409444 3/3 (100%)
Ig strand F 326..331 CDD:409444 2/5 (40%)
Ig strand G 339..342 CDD:409444 0/2 (0%)
Protein Kinases, catalytic domain 453..766 CDD:473864 91/295 (31%)
Blue background indicates that the domain is not in the aligned region.

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