DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnt and erbb4a

DIOPT Version :9

Sequence 1:NP_001260567.1 Gene:dnt / 35207 FlyBaseID:FBgn0024245 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001137223.1 Gene:erbb4a / 100007677 ZFINID:ZDB-GENE-030918-4 Length:1414 Species:Danio rerio


Alignment Length:503 Identity:111/503 - (22%)
Similarity:190/503 - (37%) Gaps:138/503 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PRPAINVSHSGEIPTTIQTWSIALKC-SGLKAAEVDVTVSLEVVLNRSLNNVTHLVFRRKKICLM 182
            |...:...|..:.|..::      || .||:.|...:....|.      ||..|       .|..
Zfish   573 PDHCVKCLHLKDGPNCVE------KCPDGLQGANSFIFKYAET------NNECH-------PCHP 618

  Fly   183 NDSAEDLSEDVDDPQLLETV-MLPPTGLIT--LVVGVSVAMGSVCLLLMIAYCVKGAANKRQHHQ 244
            |     .::....|::.:.| ||..|.||.  |:.|:.|.   |.:.|.:|..::..:.|::.  
Zfish   619 N-----CTQGCTGPRIQDCVGMLDRTPLIAAGLIGGLFVI---VIIALSVAVYIRRKSIKKKR-- 673

  Fly   245 HGGQPMRTSSFQRLNTHPPCQSSMGSAAYMTPSIIAPIHGSSLPRKVPVSVEQQHPEELHRRISE 309
                     :.:|               ::...::.|:..|...           |.:...||.:
Zfish   674 ---------ALRR---------------FLETELVEPLTPSGAA-----------PNQAQLRILK 703

  Fly   310 LTVERCRVRLSSLLQEGTFGRVYRGTYNDTQD-----VLVKTVAQHASQMQVLLLLQEGMLLYGA 369
            .| |..||:   :|..|.||.||.|.:....:     |.:|.:.:.......:..:.|.:::...
Zfish   704 ET-ELKRVK---ILGAGAFGMVYXGIWVPEGETVKIPVAIKILNESTGPKANVEFMDEALIMASM 764

  Fly   370 SHPGILSVLGVSIEDHTTPFVLYPALNNTRNLKQFLLDPACARTVTTIQIVMMASQLSMALDHLH 434
            .||.::.:|||                        .|.|       |||:|.........||::|
Zfish   765 EHPHLVRLLGV------------------------CLSP-------TIQLVTQLMPHGCLLDYVH 798

  Fly   435 SH--------------------------GVVHKDIATRNCVIDDQLRVKLSDSSLSR--DLFPSD 471
            .|                          .:||:.:|.||.::.....:|::|..|:|  |....:
Zfish   799 EHQDNIGSQLLLNWCVQIAKGMMXLEERRLVHRXLAARNVLVKSPNHIKITDFGLARLLDTDEKE 863

  Fly   472 YNCLGDSENRPVKWMSLEALQHKQFSEASDSWAFGVLMWELCTSAKQPYAEVDPFEMEHYLKDGY 536
            ||  .|....|:|||:||.:.:::|:..||.|::||.:|||.|....||..:...::...|:.|.
Zfish   864 YN--SDGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGXPYDGIPTRDIPDILEKGE 926

  Fly   537 RLAQPFNCPDELFTIMAYCWALLPAERPTFAQLQSCLSEFYSQITRYV 584
            ||.||..|..:::.:|..||.:....||.|.:|.:..|.......||:
Zfish   927 RLPQPPICTIDVYMVMVKCWMIDADSRPRFKELAAEFSRMARDPQRYL 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dntNP_001260567.1 WIF 46..182 CDD:128745 13/63 (21%)
PKc_like 310..580 CDD:304357 75/302 (25%)
Pkinase_Tyr 317..573 CDD:285015 71/288 (25%)
erbb4aNP_001137223.1 Recep_L_domain 54..166 CDD:279382
FU 182..216 CDD:214589
Furin-like 184..331 CDD:279142
FU 228..273 CDD:238021
Recep_L_domain 357..477 CDD:279382
GF_recep_IV 501..632 CDD:291509 15/82 (18%)
FU 502..552 CDD:238021
FU 548..595 CDD:214589 5/27 (19%)
TM_ErbB4 631..674 CDD:213053 13/56 (23%)
PKc_like 699..995 CDD:304357 79/313 (25%)
Pkinase_Tyr 707..963 CDD:285015 72/291 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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