DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17564 and CCDC42

DIOPT Version :10

Sequence 1:NP_609954.1 Gene:CG17564 / 35205 FlyBaseID:FBgn0032768 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_653282.2 Gene:CCDC42 / 146849 HGNCID:26528 Length:316 Species:Homo sapiens


Alignment Length:336 Identity:68/336 - (20%)
Similarity:140/336 - (41%) Gaps:44/336 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NLDLRPEDAVGDYISSKQQNKFFVI---PPNSDSAGDSIELIYVNNLRE----HEAMLK----LQ 68
            :|.:..|:.:.:|...:...:...:   .||.:.|.:|..:..:...:|    |:.|::    .|
Human     2 SLGIMEEEDLAEYFRLQYGERLLQMLQKLPNVEGASESPSIWLLEKKKETEIMHQTMVQKKKMFQ 66

  Fly    69 EEMLTSAKRQTKLNSARVRNMYKIQERLRRRFIEVNSFIKDCADKKRV-----AEKTAQAETLNH 128
            ..|.|...|..:|.....:....||:  ..:||:.|       |:||:     |.|..:.:..:.
Human    67 RRMETLNLRWEELGVKEAQLKAHIQK--SEQFIQEN-------DQKRIRAMKKANKERELKCQHM 122

  Fly   129 KELGEGIESFKDSIGELKAFREALKATVQEFQPYEKVLDEVVKVSDIFVSPKDCTDRCDALMLAQ 193
            :||.:.    |..:..|:...:.|.|.::::..:.|.|::||:.|: |....:...|...|:..:
Human   123 QELTKR----KQEMVALRLEHQRLSAKLKDYYIFNKYLEKVVENSE-FEEIHEVIARYKTLVSMR 182

  Fly   194 VEINKLEHQKLQDIENMRQRMVQITNDAALTVLGLKNDLAKLERSYNESRVQCLRWEKILAKTKD 258
            .::.:...:..:.||..:.|:.:...:....:|...|:||:|:..::.:|...:.||...|.   
Human   183 HDLMQSAQEGQEKIERAKARLARYMEEKDDEILQQNNELARLQMRFDRARSNVIFWESRWAH--- 244

  Fly   259 AINNNYMDKERTIDAI----TNLHRILLRRRDVHSFPARGDLDKVLDAIMGEVEILTGVVKEIES 319
             |.|....|...:..|    .||.:|:.:.....:..|..|..|.||.|...::..:.:..|:: 
Human   245 -IQNTAAKKTLLLGTIKMATLNLFQIVSKHLKEVTEVALEDTHKQLDMIQQFIQDRSDIWAEVK- 307

  Fly   320 SDPSIKHEEAR 330
                 |.|:.|
Human   308 -----KKEQQR 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17564NP_609954.1 DUF4200 54..172 CDD:464003 28/130 (22%)
CCDC158 <113..>308 CDD:464943 43/203 (21%)
CCDC42NP_653282.2 DUF4200 44..162 CDD:464003 28/130 (22%)
Smc <47..>315 CDD:440809 61/291 (21%)

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