DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub37C and TUB3

DIOPT Version :10

Sequence 1:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_013582.1 Gene:TUB3 / 854915 SGDID:S000004593 Length:445 Species:Saccharomyces cerevisiae


Alignment Length:444 Identity:133/444 - (29%)
Similarity:242/444 - (54%) Gaps:24/444 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT---DGQDRKDVFFYQADDNHYIPRAV 65
            |:|::.:||.|.|||...|:...|||||..||.|||..:   .|::....||::.....::|||:
Yeast     3 EVISINVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAI 67

  Fly    66 LIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGS 129
            .:||||.||:.:.|..:.:|::.|.:...|.  .|.||:|.| ::.|.::.:||.:.:.:.||..
Yeast    68 YVDLEPNVIDEVRTGRFKELFHPEQLINGKE--DAANNYARGHYTVGREIVDEVEERIRKMADQC 130

  Fly   130 DSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKR 194
            |.|:||:..||:.||||||:||.:||.||..:.||....::|:| ..::|..||:|||::||...
Yeast   131 DGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYP-APQLSTSVVEPYNTVLTTHT 194

  Fly   195 LTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTAS 259
            ..:.||...::||.|:..|....|.|..|:|:.:|.|::.::|..|.:||:...:|.:|.....:
Yeast   195 TLEHADCTFMVDNEAIYDICKRNLGISRPSFSNLNGLIAQVISSVTASLRFDGSLNVDLNEFQTN 259

  Fly   260 LIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSA--LTDKQSRQCFVSIL 322
            |:|.|::||.:..|.|::|  :.:.:....:|.::.....:|.|.||..  ...|....|.    
Yeast   260 LVPYPRIHFPLVSYAPILS--KKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCL---- 318

  Fly   323 NIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGL-----MMANH 382
             :.:|:|....|.:::::::.:|....:.|.|...::.:....|.|..:.:::.:     |::|.
Yeast   319 -LYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNT 382

  Fly   383 TGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEY 436
            |.|:..:||...::|.:..:.||:..:..|.|.:.:.||   ||:.:..|.::|
Yeast   383 TAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTE---AREDLAALERDY 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 132/442 (30%)
TUB3NP_013582.1 alpha_tubulin 2..436 CDD:276955 133/444 (30%)

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